fast.genomicscompare 6,575 genera of bacteria & archaea

 

WMHbin7 sp902725215 LM-1

Genome identifier: GCA_902725215.1

NCBI assembly name: MTBLM1_PRJEB35448

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodospirillales, WMHbin7, WMHbin7, WMHbin7 sp902725215

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodospirillales, Rhodospirillaceae

Scaffolds: 30

Genes: 3,638 Protein-coding: 3,579 RNAs: 57 pseudogenes: 2

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
CACUVI010000001.1 Rhodospirillaceae bacterium LM-1 genome assembly, contig: MTBLM1_Contig_1, whole genome shotgun sequence 535,938
CACUVI010000002.1 Rhodospirillaceae bacterium LM-1 genome assembly, contig: MTBLM1_Contig_10, whole genome shotgun sequence 143,675
CACUVI010000003.1 Rhodospirillaceae bacterium LM-1 genome assembly, contig: MTBLM1_Contig_11, whole genome shotgun sequence 50,413
CACUVI010000004.1 Rhodospirillaceae bacterium LM-1 genome assembly, contig: MTBLM1_Contig_12, whole genome shotgun sequence 46,650
CACUVI010000005.1 Rhodospirillaceae bacterium LM-1 genome assembly, contig: MTBLM1_Contig_13, whole genome shotgun sequence 40,715
CACUVI010000006.1 Rhodospirillaceae bacterium LM-1 genome assembly, contig: MTBLM1_Contig_14, whole genome shotgun sequence 35,015
CACUVI010000007.1 Rhodospirillaceae bacterium LM-1 genome assembly, contig: MTBLM1_Contig_15, whole genome shotgun sequence 19,482
CACUVI010000008.1 Rhodospirillaceae bacterium LM-1 genome assembly, contig: MTBLM1_Contig_16, whole genome shotgun sequence 16,481
CACUVI010000009.1 Rhodospirillaceae bacterium LM-1 genome assembly, contig: MTBLM1_Contig_17, whole genome shotgun sequence 11,852
CACUVI010000010.1 Rhodospirillaceae bacterium LM-1 genome assembly, contig: MTBLM1_Contig_18, whole genome shotgun sequence 9,807
CACUVI010000011.1 Rhodospirillaceae bacterium LM-1 genome assembly, contig: MTBLM1_Contig_19, whole genome shotgun sequence 4,039
CACUVI010000012.1 Rhodospirillaceae bacterium LM-1 genome assembly, contig: MTBLM1_Contig_2, whole genome shotgun sequence 503,052
CACUVI010000013.1 Rhodospirillaceae bacterium LM-1 genome assembly, contig: MTBLM1_Contig_20, whole genome shotgun sequence 2,498
CACUVI010000014.1 Rhodospirillaceae bacterium LM-1 genome assembly, contig: MTBLM1_Contig_21, whole genome shotgun sequence 1,501
CACUVI010000015.1 Rhodospirillaceae bacterium LM-1 genome assembly, contig: MTBLM1_Contig_22, whole genome shotgun sequence 1,272
CACUVI010000016.1 Rhodospirillaceae bacterium LM-1 genome assembly, contig: MTBLM1_Contig_23, whole genome shotgun sequence 967
CACUVI010000017.1 Rhodospirillaceae bacterium LM-1 genome assembly, contig: MTBLM1_Contig_24, whole genome shotgun sequence 876
CACUVI010000018.1 Rhodospirillaceae bacterium LM-1 genome assembly, contig: MTBLM1_Contig_25, whole genome shotgun sequence 465
CACUVI010000019.1 Rhodospirillaceae bacterium LM-1 genome assembly, contig: MTBLM1_Contig_26, whole genome shotgun sequence 382
CACUVI010000020.1 Rhodospirillaceae bacterium LM-1 genome assembly, contig: MTBLM1_Contig_27, whole genome shotgun sequence 331
CACUVI010000021.1 Rhodospirillaceae bacterium LM-1 genome assembly, contig: MTBLM1_Contig_28, whole genome shotgun sequence 286
CACUVI010000022.1 Rhodospirillaceae bacterium LM-1 genome assembly, contig: MTBLM1_Contig_29, whole genome shotgun sequence 279
CACUVI010000023.1 Rhodospirillaceae bacterium LM-1 genome assembly, contig: MTBLM1_Contig_3, whole genome shotgun sequence 386,272
CACUVI010000024.1 Rhodospirillaceae bacterium LM-1 genome assembly, contig: MTBLM1_Contig_30, whole genome shotgun sequence 279
CACUVI010000025.1 Rhodospirillaceae bacterium LM-1 genome assembly, contig: MTBLM1_Contig_4, whole genome shotgun sequence 364,589
CACUVI010000026.1 Rhodospirillaceae bacterium LM-1 genome assembly, contig: MTBLM1_Contig_5, whole genome shotgun sequence 313,014
CACUVI010000027.1 Rhodospirillaceae bacterium LM-1 genome assembly, contig: MTBLM1_Contig_6, whole genome shotgun sequence 311,016
CACUVI010000028.1 Rhodospirillaceae bacterium LM-1 genome assembly, contig: MTBLM1_Contig_7, whole genome shotgun sequence 293,072
CACUVI010000029.1 Rhodospirillaceae bacterium LM-1 genome assembly, contig: MTBLM1_Contig_8, whole genome shotgun sequence 248,454
CACUVI010000030.1 Rhodospirillaceae bacterium LM-1 genome assembly, contig: MTBLM1_Contig_9, whole genome shotgun sequence 231,150

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory