fast.genomicscompare 6,575 genera of bacteria & archaea

 

DUSC01 sp008933895 RHIZO

Genome identifier: GCA_905339215.1

NCBI assembly name: METH_ENR_15

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhizobiales, Rhizobiaceae, DUSC01, DUSC01 sp008933895

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Hyphomicrobiales, Rhizobiaceae

Scaffolds: 136

Genes: 5,331 Protein-coding: 5,159 RNAs: 172 pseudogenes: 0

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
CAJPFN010000001.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_1, whole genome shotgun sequence 109,858
CAJPFN010000002.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_2, whole genome shotgun sequence 48,087
CAJPFN010000003.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_3, whole genome shotgun sequence 13,091
CAJPFN010000004.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_4, whole genome shotgun sequence 7,266
CAJPFN010000005.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_5, whole genome shotgun sequence 130,580
CAJPFN010000006.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_6, whole genome shotgun sequence 32,226
CAJPFN010000007.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_7, whole genome shotgun sequence 7,986
CAJPFN010000008.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_8, whole genome shotgun sequence 68,175
CAJPFN010000009.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_9, whole genome shotgun sequence 67,265
CAJPFN010000010.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_10, whole genome shotgun sequence 45,276
CAJPFN010000011.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_11, whole genome shotgun sequence 118,771
CAJPFN010000012.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_12, whole genome shotgun sequence 85,033
CAJPFN010000013.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_13, whole genome shotgun sequence 84,760
CAJPFN010000014.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_14, whole genome shotgun sequence 395,546
CAJPFN010000015.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_15, whole genome shotgun sequence 37,392
CAJPFN010000016.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_16, whole genome shotgun sequence 117,272
CAJPFN010000017.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_17, whole genome shotgun sequence 119,996
CAJPFN010000018.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_18, whole genome shotgun sequence 44,126
CAJPFN010000019.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_19, whole genome shotgun sequence 69,740
CAJPFN010000020.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_20, whole genome shotgun sequence 42,037
CAJPFN010000021.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_21, whole genome shotgun sequence 112,057
CAJPFN010000022.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_22, whole genome shotgun sequence 1,907
CAJPFN010000023.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_23, whole genome shotgun sequence 33,872
CAJPFN010000024.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_24, whole genome shotgun sequence 141,919
CAJPFN010000025.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_25, whole genome shotgun sequence 122,660
CAJPFN010000026.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_26, whole genome shotgun sequence 13,450
CAJPFN010000027.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_27, whole genome shotgun sequence 6,693
CAJPFN010000028.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_28, whole genome shotgun sequence 74,114
CAJPFN010000029.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_29, whole genome shotgun sequence 41,949
CAJPFN010000030.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_30, whole genome shotgun sequence 22,356
CAJPFN010000031.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_31, whole genome shotgun sequence 8,541
CAJPFN010000032.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_32, whole genome shotgun sequence 43,810
CAJPFN010000033.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_33, whole genome shotgun sequence 96,987
CAJPFN010000034.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_34, whole genome shotgun sequence 1,033
CAJPFN010000035.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_35, whole genome shotgun sequence 101,787
CAJPFN010000036.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_36, whole genome shotgun sequence 24,093
CAJPFN010000037.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_37, whole genome shotgun sequence 89,453
CAJPFN010000038.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_38, whole genome shotgun sequence 91,330
CAJPFN010000039.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_39, whole genome shotgun sequence 17,254
CAJPFN010000040.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_40, whole genome shotgun sequence 31,485
CAJPFN010000041.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_41, whole genome shotgun sequence 39,279
CAJPFN010000042.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_42, whole genome shotgun sequence 69,633
CAJPFN010000043.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_43, whole genome shotgun sequence 13,400
CAJPFN010000044.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_44, whole genome shotgun sequence 41,005
CAJPFN010000045.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_45, whole genome shotgun sequence 5,629
CAJPFN010000046.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_46, whole genome shotgun sequence 59,779
CAJPFN010000047.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_47, whole genome shotgun sequence 68,529
CAJPFN010000048.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_48, whole genome shotgun sequence 41,730
CAJPFN010000049.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_49, whole genome shotgun sequence 34,186
CAJPFN010000050.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_50, whole genome shotgun sequence 80,218
CAJPFN010000051.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_51, whole genome shotgun sequence 64,121
CAJPFN010000052.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_52, whole genome shotgun sequence 44,170
CAJPFN010000053.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_53, whole genome shotgun sequence 91,807
CAJPFN010000054.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_54, whole genome shotgun sequence 28,406
CAJPFN010000055.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_55, whole genome shotgun sequence 6,080
CAJPFN010000056.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_56, whole genome shotgun sequence 73,251
CAJPFN010000057.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_57, whole genome shotgun sequence 2,446
CAJPFN010000058.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_58, whole genome shotgun sequence 11,217
CAJPFN010000059.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_59, whole genome shotgun sequence 63,773
CAJPFN010000060.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_60, whole genome shotgun sequence 1,848
CAJPFN010000061.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_61, whole genome shotgun sequence 18,440
CAJPFN010000062.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_62, whole genome shotgun sequence 37,155
CAJPFN010000063.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_63, whole genome shotgun sequence 25,223
CAJPFN010000064.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_64, whole genome shotgun sequence 12,758
CAJPFN010000065.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_65, whole genome shotgun sequence 5,779
CAJPFN010000066.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_66, whole genome shotgun sequence 49,935
CAJPFN010000067.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_67, whole genome shotgun sequence 91,288
CAJPFN010000068.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_68, whole genome shotgun sequence 8,800
CAJPFN010000069.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_69, whole genome shotgun sequence 6,549
CAJPFN010000070.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_70, whole genome shotgun sequence 53,872
CAJPFN010000071.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_71, whole genome shotgun sequence 3,515
CAJPFN010000072.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_72, whole genome shotgun sequence 22,099
CAJPFN010000073.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_73, whole genome shotgun sequence 15,747
CAJPFN010000074.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_74, whole genome shotgun sequence 6,199
CAJPFN010000075.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_75, whole genome shotgun sequence 6,538
CAJPFN010000076.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_76, whole genome shotgun sequence 61,895
CAJPFN010000077.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_77, whole genome shotgun sequence 129,594
CAJPFN010000078.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_78, whole genome shotgun sequence 99,708
CAJPFN010000079.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_79, whole genome shotgun sequence 10,956
CAJPFN010000080.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_80, whole genome shotgun sequence 12,772
CAJPFN010000081.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_81, whole genome shotgun sequence 47,570
CAJPFN010000082.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_82, whole genome shotgun sequence 3,641
CAJPFN010000083.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_83, whole genome shotgun sequence 34,734
CAJPFN010000084.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_84, whole genome shotgun sequence 42,516
CAJPFN010000085.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_85, whole genome shotgun sequence 3,352
CAJPFN010000086.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_86, whole genome shotgun sequence 48,607
CAJPFN010000087.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_87, whole genome shotgun sequence 32,302
CAJPFN010000088.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_88, whole genome shotgun sequence 41,355
CAJPFN010000089.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_89, whole genome shotgun sequence 22,818
CAJPFN010000090.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_90, whole genome shotgun sequence 16,268
CAJPFN010000091.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_91, whole genome shotgun sequence 42,695
CAJPFN010000092.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_92, whole genome shotgun sequence 13,192
CAJPFN010000093.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_93, whole genome shotgun sequence 10,307
CAJPFN010000094.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_94, whole genome shotgun sequence 14,831
CAJPFN010000095.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_95, whole genome shotgun sequence 8,429
CAJPFN010000096.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_96, whole genome shotgun sequence 78,508
CAJPFN010000097.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_97, whole genome shotgun sequence 2,856
CAJPFN010000098.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_98, whole genome shotgun sequence 29,811
CAJPFN010000099.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_99, whole genome shotgun sequence 23,736
CAJPFN010000100.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_100, whole genome shotgun sequence 2,637
CAJPFN010000101.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_101, whole genome shotgun sequence 28,165
CAJPFN010000102.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_102, whole genome shotgun sequence 27,112
CAJPFN010000103.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_103, whole genome shotgun sequence 3,480
CAJPFN010000104.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_104, whole genome shotgun sequence 1,110
CAJPFN010000105.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_105, whole genome shotgun sequence 1,153
CAJPFN010000106.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_106, whole genome shotgun sequence 37,108
CAJPFN010000107.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_107, whole genome shotgun sequence 29,110
CAJPFN010000108.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_108, whole genome shotgun sequence 37,369
CAJPFN010000109.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_109, whole genome shotgun sequence 34,262
CAJPFN010000110.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_110, whole genome shotgun sequence 43,078
CAJPFN010000111.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_111, whole genome shotgun sequence 8,239
CAJPFN010000112.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_112, whole genome shotgun sequence 1,185
CAJPFN010000113.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_113, whole genome shotgun sequence 22,213
CAJPFN010000114.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_114, whole genome shotgun sequence 19,164
CAJPFN010000115.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_115, whole genome shotgun sequence 1,236
CAJPFN010000116.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_116, whole genome shotgun sequence 9,426
CAJPFN010000117.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_117, whole genome shotgun sequence 1,343
CAJPFN010000118.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_118, whole genome shotgun sequence 1,292
CAJPFN010000119.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_119, whole genome shotgun sequence 40,414
CAJPFN010000120.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_120, whole genome shotgun sequence 43,436
CAJPFN010000121.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_121, whole genome shotgun sequence 38,269
CAJPFN010000122.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_122, whole genome shotgun sequence 1,466
CAJPFN010000123.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_123, whole genome shotgun sequence 29,971
CAJPFN010000124.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_124, whole genome shotgun sequence 17,637
CAJPFN010000125.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_125, whole genome shotgun sequence 5,440
CAJPFN010000126.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_126, whole genome shotgun sequence 1,381
CAJPFN010000127.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_127, whole genome shotgun sequence 58,016
CAJPFN010000128.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_128, whole genome shotgun sequence 5,962
CAJPFN010000129.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_129, whole genome shotgun sequence 14,779
CAJPFN010000130.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_130, whole genome shotgun sequence 32,330
CAJPFN010000131.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_131, whole genome shotgun sequence 1,842
CAJPFN010000132.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_132, whole genome shotgun sequence 2,240
CAJPFN010000133.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_133, whole genome shotgun sequence 1,259
CAJPFN010000134.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_134, whole genome shotgun sequence 5,247
CAJPFN010000135.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_135, whole genome shotgun sequence 30,269
CAJPFN010000136.1 Rhizobiaceae bacterium genome assembly, contig: CONTIG_136, whole genome shotgun sequence 13,121

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory