fast.genomicscompare 6,575 genera of bacteria & archaea

 

Methanosphaera stadtmanae DSM 3091

Genome identifier: GCF_000012545.1

NCBI assembly name: ASM1254v1

GTDB taxonomy: Archaea, Methanobacteriota, Methanobacteria, Methanobacteriales, Methanobacteriaceae, Methanosphaera, Methanosphaera stadtmanae

NCBI taxonomy: Archaea, Euryarchaeota, Methanobacteria, Methanobacteriales, Methanobacteriaceae, Methanosphaera, Methanosphaera stadtmanae

Scaffolds: 1

Genes: 1,606 Protein-coding: 1,547 RNAs: 55 pseudogenes: 4

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NC_007681.1 Methanosphaera stadtmanae DSM 3091, complete sequence 1,767,403

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory