fast.genomicscompare 6,575 genera of bacteria & archaea

 

Nitrosococcus oceani ATCC 19707;JCM30415 (Type strain)

Genome identifier: GCF_000012805.1

NCBI assembly name: ASM1280v1

GTDB taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, Nitrosococcales, Nitrosococcaceae, Nitrosococcus, Nitrosococcus oceani

NCBI taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, Chromatiales, Chromatiaceae, Nitrosococcus, Nitrosococcus oceani

Scaffolds: 2

Genes: 3,341 Protein-coding: 3,236 RNAs: 55 pseudogenes: 50

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NC_007483.1 Nitrosococcus oceani ATCC 19707 plasmid A, complete sequence 40,420
NC_007484.1 Nitrosococcus oceani ATCC 19707, complete sequence 3,481,691

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory