fast.genomicscompare 6,575 genera of bacteria & archaea

 

Cereibacter_A sphaeroides 2.4.1

Genome identifier: GCF_000012905.2

NCBI assembly name: ASM1290v2

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Rhodobacteraceae, Cereibacter_A, Cereibacter_A sphaeroides

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Paracoccaceae, Cereibacter, Cereibacter sphaeroides

Scaffolds: 7

Genes: 4,466 Protein-coding: 4,310 RNAs: 65 pseudogenes: 91

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NC_007488.2 Cereibacter sphaeroides 2.4.1 plasmid B, complete sequence 114,179
NC_007489.1 Cereibacter sphaeroides 2.4.1 plasmid C, complete sequence 105,284
NC_007490.2 Cereibacter sphaeroides 2.4.1 plasmid D, complete sequence 100,827
NC_007493.2 Cereibacter sphaeroides 2.4.1 chromosome 1, complete sequence 3,188,524
NC_007494.2 Cereibacter sphaeroides 2.4.1 chromosome 2, complete sequence 943,018
NC_009007.1 Cereibacter sphaeroides 2.4.1 plasmid A, partial sequence 114,045
NC_009008.1 Cereibacter sphaeroides 2.4.1 plasmid E, partial sequence 37,100

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory