fast.genomicscompare 6,575 genera of bacteria & archaea

 

Altererythrobacter_D litoralis_A HTCC2594

Genome identifier: GCF_000013005.1

NCBI assembly name: ASM1300v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Sphingomonadales, Sphingomonadaceae, Altererythrobacter_D, Altererythrobacter_D litoralis_A

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Sphingomonadales, Erythrobacteraceae, Erythrobacter, Erythrobacter litoralis

Scaffolds: 1

Genes: 3,011 Protein-coding: 2,952 RNAs: 50 pseudogenes: 9

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NC_007722.1 Erythrobacter litoralis HTCC2594, complete sequence 3,052,398

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory