fast.genomicscompare 6,575 genera of bacteria & archaea

 

Rhodospirillum rubrum ATCC 11170

Genome identifier: GCF_000013085.1

NCBI assembly name: ASM1308v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodospirillales, Rhodospirillaceae, Rhodospirillum, Rhodospirillum rubrum

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodospirillales, Rhodospirillaceae, Rhodospirillum, Rhodospirillum rubrum

Scaffolds: 2

Genes: 3,973 Protein-coding: 3,863 RNAs: 70 pseudogenes: 40

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NC_007641.1 Rhodospirillum rubrum ATCC 11170 plasmid unnamed, complete sequence 53,732
NC_007643.1 Rhodospirillum rubrum ATCC 11170, complete sequence 4,352,825

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory