fast.genomicscompare 6,575 genera of bacteria & archaea

 

Pseudopelobacter propionicus DSM 2379

Genome identifier: GCF_000015045.1

NCBI assembly name: ASM1504v1

GTDB taxonomy: Bacteria, Desulfobacterota, Desulfuromonadia, Geobacterales, Pseudopelobacteraceae, Pseudopelobacter, Pseudopelobacter propionicus

NCBI taxonomy: Bacteria, Thermodesulfobacteriota, Desulfuromonadia, Desulfuromonadales, Desulfuromonadaceae, Pelobacter, Pelobacter propionicus

Scaffolds: 3

Genes: 3,913 Protein-coding: 3,832 RNAs: 69 pseudogenes: 12

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NC_008607.1 Pelobacter propionicus DSM 2379 plasmid pPRO1, complete sequence 202,397
NC_008608.1 Pelobacter propionicus DSM 2379 plasmid pPRO2, complete sequence 30,722
NC_008609.1 Pelobacter propionicus DSM 2379, complete sequence 4,008,000

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory