fast.genomicscompare 6,575 genera of bacteria & archaea

 

Halorhodospira halophila SL1

Genome identifier: GCF_000015585.1

NCBI assembly name: ASM1558v1

GTDB taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, Nitrococcales, Halorhodospiraceae, Halorhodospira, Halorhodospira halophila

NCBI taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, Chromatiales, Ectothiorhodospiraceae, Halorhodospira, Halorhodospira halophila

Scaffolds: 1

Genes: 2,518 Protein-coding: 2,434 RNAs: 56 pseudogenes: 28

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NC_008789.1 Halorhodospira halophila SL1, complete sequence 2,678,452

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory