fast.genomicscompare 6,575 genera of bacteria & archaea

 

Archaeoglobus_B profundus DSM 5631

Genome identifier: GCF_000025285.1

NCBI assembly name: ASM2528v1

GTDB taxonomy: Archaea, Halobacteriota, Archaeoglobi, Archaeoglobales, Archaeoglobaceae, Archaeoglobus_B, Archaeoglobus_B profundus

NCBI taxonomy: Archaea, Euryarchaeota, Archaeoglobi, Archaeoglobales, Archaeoglobaceae, Archaeoglobus, Archaeoglobus profundus

Scaffolds: 2

Genes: 1,893 Protein-coding: 1,833 RNAs: 52 pseudogenes: 8

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NC_013741.1 Archaeoglobus profundus DSM 5631, complete sequence 1,560,622
NC_013742.1 Archaeoglobus profundus DSM 5631 plasmid pArcpr01, complete sequence 2,801

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory