fast.genomicscompare 6,575 genera of bacteria & archaea

 

Haloferax volcanii DS2

Genome identifier: GCF_000025685.1

NCBI assembly name: ASM2568v1

GTDB taxonomy: Archaea, Halobacteriota, Halobacteria, Halobacteriales, Haloferacaceae, Haloferax, Haloferax volcanii

NCBI taxonomy: Archaea, Euryarchaeota, Halobacteria, Haloferacales, Haloferacaceae, Haloferax, Haloferax volcanii

Scaffolds: 5

Genes: 4,065 Protein-coding: 3,895 RNAs: 61 pseudogenes: 109

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NC_013964.1 Haloferax volcanii DS2 plasmid pHV3, complete sequence 437,906
NC_013965.1 Haloferax volcanii DS2 plasmid pHV2, complete sequence 6,359
NC_013966.1 Haloferax volcanii DS2 plasmid pHV4, complete sequence 635,786
NC_013967.1 Haloferax volcanii DS2, complete sequence 2,847,757
NC_013968.1 Haloferax volcanii DS2 plasmid pHV1, complete sequence 85,092

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory