fast.genomicscompare 6,575 genera of bacteria & archaea

 

Desulfotalea psychrophila LSv54

Genome identifier: GCF_000025945.1

NCBI assembly name: ASM2594v1

GTDB taxonomy: Bacteria, Desulfobacterota, Desulfobulbia, Desulfobulbales, Desulfocapsaceae, Desulfotalea, Desulfotalea psychrophila

NCBI taxonomy: Bacteria, Thermodesulfobacteriota, Desulfobulbia, Desulfobulbales, Desulfocapsaceae, Desulfotalea, Desulfotalea psychrophila

Scaffolds: 3

Genes: 3,246 Protein-coding: 3,115 RNAs: 91 pseudogenes: 40

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NC_006138.1 Desulfotalea psychrophila LSv54, complete sequence 3,523,383
NC_006139.1 Desulfotalea psychrophila LSv54 plasmid large, complete sequence 121,587
NC_006140.1 Desulfotalea psychrophila LSv54 plasmid small, complete sequence 14,664

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory