fast.genomicscompare 6,575 genera of bacteria & archaea

 

Bacteroides fragilis NCTC 9343

Genome identifier: GCF_000025985.1

NCBI assembly name: ASM2598v1

GTDB taxonomy: Bacteria, Bacteroidota, Bacteroidia, Bacteroidales, Bacteroidaceae, Bacteroides, Bacteroides fragilis

NCBI taxonomy: Bacteria, Bacteroidota, Bacteroidia, Bacteroidales, Bacteroidaceae, Bacteroides, Bacteroides fragilis

Scaffolds: 2

Genes: 4,321 Protein-coding: 4,158 RNAs: 94 pseudogenes: 69

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NC_003228.3 Bacteroides fragilis NCTC 9343, complete sequence 5,205,140
NC_006873.1 Bacteroides fragilis NCTC 9343 plasmid pBF9343, complete sequence 36,560

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory