fast.genomicscompare 6,575 genera of bacteria & archaea

 

Syntrophothermus lipocalidus DSM 12680

Genome identifier: GCF_000092405.1

NCBI assembly name: ASM9240v1

GTDB taxonomy: Bacteria, Bacillota_B, Syntrophomonadia, Syntrophomonadales, Syntrophothermaceae, Syntrophothermus, Syntrophothermus lipocalidus

NCBI taxonomy: Bacteria, Bacillota, Clostridia, Eubacteriales, Syntrophomonadaceae, Syntrophothermus, Syntrophothermus lipocalidus

Scaffolds: 1

Genes: 2,395 Protein-coding: 2,320 RNAs: 56 pseudogenes: 19

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NC_014220.1 Syntrophothermus lipocalidus DSM 12680, complete sequence 2,405,559

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory