fast.genomicscompare 6,575 genera of bacteria & archaea

 

Nitrococcus mobilis Nb-231

Genome identifier: GCF_000153205.1

NCBI assembly name: ASM15320v1

GTDB taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, Nitrococcales, Nitrococcaceae, Nitrococcus, Nitrococcus mobilis

NCBI taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, Chromatiales, Ectothiorhodospiraceae, Nitrococcus, Nitrococcus mobilis

Scaffolds: 9

Genes: 3,446 Protein-coding: 3,286 RNAs: 53 pseudogenes: 107

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_AAOF01000035.1 Nitrococcus mobilis Nb-231 1099646003787, whole genome shotgun sequence 1,584
NZ_AAOF01000036.1 Nitrococcus mobilis Nb-231 1099646003794, whole genome shotgun sequence 1,566
NZ_AAOF01000037.1 Nitrococcus mobilis Nb-231 1099646003804, whole genome shotgun sequence 1,461
NZ_AAOF01000039.1 Nitrococcus mobilis Nb-231 1099646003832, whole genome shotgun sequence 1,394
NZ_AAOF01000040.1 Nitrococcus mobilis Nb-231 1099646003782, whole genome shotgun sequence 1,214
NZ_AAOF01000041.1 Nitrococcus mobilis Nb-231 1099646003803, whole genome shotgun sequence 1,139
NZ_AAOF01000042.1 Nitrococcus mobilis Nb-231 1099646003835, whole genome shotgun sequence 1,110
NZ_AAOF01000043.1 Nitrococcus mobilis Nb-231 1099646003839, whole genome shotgun sequence 1,058
NZ_CH672427.1 Nitrococcus mobilis Nb-231 scf_1099646003885, whole genome shotgun sequence 3,613,155

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory