fast.genomicscompare 6,575 genera of bacteria & archaea

 

Neptuniibacter caesariensis MED92

Genome identifier: GCF_000153345.1

NCBI assembly name: ASM15334v1

GTDB taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, Pseudomonadales, Nitrincolaceae, Neptuniibacter, Neptuniibacter caesariensis

NCBI taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, Oceanospirillales, Oceanospirillaceae, Neptuniibacter, Neptuniibacter caesariensis

Scaffolds: 6

Genes: 3,670 Protein-coding: 3,602 RNAs: 50 pseudogenes: 18

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_AAOW01000058.1 Neptuniibacter caesariensis strain MED92 1099521380330, whole genome shotgun sequence 1,657
NZ_CH724125.1 Neptuniibacter caesariensis strain MED92 scf_1099521380394, whole genome shotgun sequence 2,088,278
NZ_CH724126.1 Neptuniibacter caesariensis strain MED92 scf_1099521380393, whole genome shotgun sequence 886,030
NZ_CH724127.1 Neptuniibacter caesariensis strain MED92 scf_1099521380392, whole genome shotgun sequence 780,837
NZ_CH724128.1 Neptuniibacter caesariensis strain MED92 scf_1099521380391, whole genome shotgun sequence 132,420
NZ_CH724129.1 Neptuniibacter caesariensis strain MED92 scf_1099521380390, whole genome shotgun sequence 35,533

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory