fast.genomicscompare 6,575 genera of bacteria & archaea

 

Fulvimarina pelagi HTCC2506

Genome identifier: GCF_000153705.1

NCBI assembly name: ASM15370v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhizobiales, Rhizobiaceae, Fulvimarina, Fulvimarina pelagi

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Hyphomicrobiales, Aurantimonadaceae, Fulvimarina, Fulvimarina pelagi

Scaffolds: 4

Genes: 3,529 Protein-coding: 3,406 RNAs: 62 pseudogenes: 61

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_DS022272.1 Fulvimarina pelagi HTCC2506 scf_1100011000323, whole genome shotgun sequence 3,705,815
NZ_DS022273.1 Fulvimarina pelagi HTCC2506 scf_1100011000322, whole genome shotgun sequence 97,317
NZ_DS022274.1 Fulvimarina pelagi HTCC2506 scf_1100011000321, whole genome shotgun sequence 1,760
NZ_DS022275.1 Fulvimarina pelagi HTCC2506 scf_1100011000324, whole genome shotgun sequence 1,346

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory