fast.genomicscompare 6,575 genera of bacteria & archaea

 

Shuttleworthia satelles DSM 14600

Genome identifier: GCF_000160115.1

NCBI assembly name: ASM16011v1

GTDB taxonomy: Bacteria, Bacillota_A, Clostridia, Lachnospirales, Lachnospiraceae, Shuttleworthia, Shuttleworthia satelles

NCBI taxonomy: Bacteria, Bacillota, Clostridia, Eubacteriales, Lachnospiraceae, Shuttleworthia, Shuttleworthia satelles

Scaffolds: 5

Genes: 1,969 Protein-coding: 1,870 RNAs: 63 pseudogenes: 36

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_GG665866.1 Shuttleworthella satelles DSM 14600 Scfld0, whole genome shotgun sequence 1,490,972
NZ_GG665867.1 Shuttleworthella satelles DSM 14600 Scfld1, whole genome shotgun sequence 676,438
NZ_GG665868.1 Shuttleworthella satelles DSM 14600 Scfld2, whole genome shotgun sequence 812
NZ_GG665869.1 Shuttleworthella satelles DSM 14600 Scfld3, whole genome shotgun sequence 748
NZ_GG665870.1 Shuttleworthella satelles DSM 14600 Scfld4, whole genome shotgun sequence 507

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory