fast.genomicscompare 6,575 genera of bacteria & archaea

 

Acetomicrobium thermoterrenum OS1

Genome identifier: GCF_000160455.2

NCBI assembly name: ASM16045v2

GTDB taxonomy: Bacteria, Synergistota, Synergistia, Synergistales, Acetomicrobiaceae, Acetomicrobium, Acetomicrobium thermoterrenum

NCBI taxonomy: Bacteria, Synergistota, Synergistia, Synergistales, Acetomicrobiaceae, Acetomicrobium, Acetomicrobium hydrogeniformans

Scaffolds: 8

Genes: 2,123 Protein-coding: 2,051 RNAs: 58 pseudogenes: 14

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_ACJX03000001.1 Acetomicrobium hydrogeniformans ATCC BAA-1850 strain OS1 A_hydrogeniformans-1.0.1_Cont0.1, whole genome shotgun sequence 2,103,414
NZ_ACJX03000002.1 Acetomicrobium hydrogeniformans ATCC BAA-1850 strain OS1 A_hydrogeniformans-1.0.1_Cont1.1, whole genome shotgun sequence 7,345
NZ_ACJX03000003.1 Acetomicrobium hydrogeniformans ATCC BAA-1850 strain OS1 A_hydrogeniformans-1.0.1_Cont2.1, whole genome shotgun sequence 5,386
NZ_ACJX03000004.1 Acetomicrobium hydrogeniformans ATCC BAA-1850 strain OS1 A_hydrogeniformans-1.0.1_Cont3.1, whole genome shotgun sequence 4,890
NZ_ACJX03000005.1 Acetomicrobium hydrogeniformans ATCC BAA-1850 strain OS1 A_hydrogeniformans-1.0.1_Cont4.1, whole genome shotgun sequence 1,082
NZ_ACJX03000006.1 Acetomicrobium hydrogeniformans ATCC BAA-1850 strain OS1 A_hydrogeniformans-1.0.1_Cont5.1, whole genome shotgun sequence 794
NZ_ACJX03000007.1 Acetomicrobium hydrogeniformans ATCC BAA-1850 strain OS1 A_hydrogeniformans-1.0.1_Cont6.1, whole genome shotgun sequence 507
NZ_ACJX03000008.1 Acetomicrobium hydrogeniformans ATCC BAA-1850 strain OS1 A_hydrogeniformans-1.0.1_Cont7.1, whole genome shotgun sequence 507

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory