fast.genomicscompare 6,575 genera of bacteria & archaea

 

Rhodomicrobium vannielii ATCC 17100

Genome identifier: GCF_000166055.1

NCBI assembly name: ASM16605v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhizobiales, Rhodomicrobiaceae, Rhodomicrobium, Rhodomicrobium vannielii

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Hyphomicrobiales, Hyphomicrobiaceae, Rhodomicrobium, Rhodomicrobium vannielii

Scaffolds: 1

Genes: 3,713 Protein-coding: 3,592 RNAs: 58 pseudogenes: 63

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NC_014664.1 Rhodomicrobium vannielii ATCC 17100, complete sequence 4,014,469

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory