fast.genomicscompare 6,575 genera of bacteria & archaea

 

Desulfuromonas acetoxidans DSM 684

Genome identifier: GCF_000167355.1

NCBI assembly name: ASM16735v1

GTDB taxonomy: Bacteria, Desulfobacterota, Desulfuromonadia, Desulfuromonadales, Desulfuromonadaceae, Desulfuromonas, Desulfuromonas acetoxidans

NCBI taxonomy: Bacteria, Thermodesulfobacteriota, Desulfuromonadia, Desulfuromonadales, Desulfuromonadaceae, Desulfuromonas, Desulfuromonas acetoxidans

Scaffolds: 51

Genes: 3,385 Protein-coding: 3,310 RNAs: 60 pseudogenes: 15

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_AAEW02000001.1 Desulfuromonas acetoxidans DSM 684 ctg66, whole genome shotgun sequence 313,951
NZ_AAEW02000002.1 Desulfuromonas acetoxidans DSM 684 ctg65, whole genome shotgun sequence 258,343
NZ_AAEW02000003.1 Desulfuromonas acetoxidans DSM 684 ctg61, whole genome shotgun sequence 244,141
NZ_AAEW02000004.1 Desulfuromonas acetoxidans DSM 684 ctg64, whole genome shotgun sequence 242,838
NZ_AAEW02000005.1 Desulfuromonas acetoxidans DSM 684 ctg60, whole genome shotgun sequence 228,521
NZ_AAEW02000006.1 Desulfuromonas acetoxidans DSM 684 ctg59, whole genome shotgun sequence 220,576
NZ_AAEW02000007.1 Desulfuromonas acetoxidans DSM 684 ctg62, whole genome shotgun sequence 215,890
NZ_AAEW02000008.1 Desulfuromonas acetoxidans DSM 684 ctg63, whole genome shotgun sequence 195,317
NZ_AAEW02000009.1 Desulfuromonas acetoxidans DSM 684 ctg58, whole genome shotgun sequence 169,836
NZ_AAEW02000010.1 Desulfuromonas acetoxidans DSM 684 ctg57, whole genome shotgun sequence 148,175
NZ_AAEW02000011.1 Desulfuromonas acetoxidans DSM 684 ctg54, whole genome shotgun sequence 133,363
NZ_AAEW02000012.1 Desulfuromonas acetoxidans DSM 684 ctg56, whole genome shotgun sequence 125,851
NZ_AAEW02000013.1 Desulfuromonas acetoxidans DSM 684 ctg47, whole genome shotgun sequence 115,266
NZ_AAEW02000014.1 Desulfuromonas acetoxidans DSM 684 ctg55, whole genome shotgun sequence 113,158
NZ_AAEW02000015.1 Desulfuromonas acetoxidans DSM 684 ctg50, whole genome shotgun sequence 110,216
NZ_AAEW02000016.1 Desulfuromonas acetoxidans DSM 684 ctg52, whole genome shotgun sequence 103,879
NZ_AAEW02000017.1 Desulfuromonas acetoxidans DSM 684 ctg53, whole genome shotgun sequence 94,913
NZ_AAEW02000018.1 Desulfuromonas acetoxidans DSM 684 ctg51, whole genome shotgun sequence 81,919
NZ_AAEW02000019.1 Desulfuromonas acetoxidans DSM 684 ctg49, whole genome shotgun sequence 75,849
NZ_AAEW02000020.1 Desulfuromonas acetoxidans DSM 684 ctg48, whole genome shotgun sequence 68,446
NZ_AAEW02000021.1 Desulfuromonas acetoxidans DSM 684 ctg45, whole genome shotgun sequence 59,771
NZ_AAEW02000022.1 Desulfuromonas acetoxidans DSM 684 ctg43, whole genome shotgun sequence 41,946
NZ_AAEW02000023.1 Desulfuromonas acetoxidans DSM 684 ctg44, whole genome shotgun sequence 38,494
NZ_AAEW02000024.1 Desulfuromonas acetoxidans DSM 684 ctg40, whole genome shotgun sequence 33,378
NZ_AAEW02000025.1 Desulfuromonas acetoxidans DSM 684 ctg42, whole genome shotgun sequence 33,061
NZ_AAEW02000026.1 Desulfuromonas acetoxidans DSM 684 ctg46, whole genome shotgun sequence 29,442
NZ_AAEW02000027.1 Desulfuromonas acetoxidans DSM 684 ctg39, whole genome shotgun sequence 28,154
NZ_AAEW02000028.1 Desulfuromonas acetoxidans DSM 684 ctg34, whole genome shotgun sequence 26,653
NZ_AAEW02000029.1 Desulfuromonas acetoxidans DSM 684 ctg41, whole genome shotgun sequence 25,836
NZ_AAEW02000030.1 Desulfuromonas acetoxidans DSM 684 ctg38, whole genome shotgun sequence 23,012
NZ_AAEW02000031.1 Desulfuromonas acetoxidans DSM 684 ctg35, whole genome shotgun sequence 20,007
NZ_AAEW02000032.1 Desulfuromonas acetoxidans DSM 684 ctg27, whole genome shotgun sequence 17,351
NZ_AAEW02000033.1 Desulfuromonas acetoxidans DSM 684 ctg36, whole genome shotgun sequence 17,262
NZ_AAEW02000034.1 Desulfuromonas acetoxidans DSM 684 ctg37, whole genome shotgun sequence 16,597
NZ_AAEW02000035.1 Desulfuromonas acetoxidans DSM 684 ctg33, whole genome shotgun sequence 16,189
NZ_AAEW02000036.1 Desulfuromonas acetoxidans DSM 684 ctg32, whole genome shotgun sequence 15,659
NZ_AAEW02000037.1 Desulfuromonas acetoxidans DSM 684 ctg30, whole genome shotgun sequence 15,387
NZ_AAEW02000038.1 Desulfuromonas acetoxidans DSM 684 ctg28, whole genome shotgun sequence 14,762
NZ_AAEW02000039.1 Desulfuromonas acetoxidans DSM 684 ctg31, whole genome shotgun sequence 13,559
NZ_AAEW02000040.1 Desulfuromonas acetoxidans DSM 684 ctg26, whole genome shotgun sequence 11,453
NZ_AAEW02000041.1 Desulfuromonas acetoxidans DSM 684 ctg23, whole genome shotgun sequence 10,919
NZ_AAEW02000042.1 Desulfuromonas acetoxidans DSM 684 ctg25, whole genome shotgun sequence 10,644
NZ_AAEW02000043.1 Desulfuromonas acetoxidans DSM 684 ctg19, whole genome shotgun sequence 8,974
NZ_AAEW02000044.1 Desulfuromonas acetoxidans DSM 684 ctg24, whole genome shotgun sequence 8,971
NZ_AAEW02000045.1 Desulfuromonas acetoxidans DSM 684 ctg29, whole genome shotgun sequence 7,448
NZ_AAEW02000046.1 Desulfuromonas acetoxidans DSM 684 ctg20, whole genome shotgun sequence 5,803
NZ_AAEW02000047.1 Desulfuromonas acetoxidans DSM 684 ctg17, whole genome shotgun sequence 4,324
NZ_AAEW02000048.1 Desulfuromonas acetoxidans DSM 684 ctg22, whole genome shotgun sequence 3,909
NZ_AAEW02000049.1 Desulfuromonas acetoxidans DSM 684 ctg16, whole genome shotgun sequence 3,699
NZ_AAEW02000050.1 Desulfuromonas acetoxidans DSM 684 ctg21, whole genome shotgun sequence 3,009
NZ_AAEW02000051.1 Desulfuromonas acetoxidans DSM 684 ctg15, whole genome shotgun sequence 2,207

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory