fast.genomicscompare 6,575 genera of bacteria & archaea

 

Dorea formicigenerans ATCC 27755

Genome identifier: GCF_000169235.1

NCBI assembly name: ASM16923v1

GTDB taxonomy: Bacteria, Bacillota_A, Clostridia, Lachnospirales, Lachnospiraceae, Dorea, Dorea formicigenerans

NCBI taxonomy: Bacteria, Bacillota, Clostridia, Eubacteriales, Lachnospiraceae, Dorea, Dorea formicigenerans

Scaffolds: 16

Genes: 3,120 Protein-coding: 2,981 RNAs: 79 pseudogenes: 60

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_AAXA02000001.1 Dorea formicigenerans ATCC 27755 D_formicigenerans-3.0.1_Cont27.1, whole genome shotgun sequence 11,599
NZ_AAXA02000002.1 Dorea formicigenerans ATCC 27755 D_formicigenerans-3.0.1_Cont21.1, whole genome shotgun sequence 27,753
NZ_AAXA02000003.1 Dorea formicigenerans ATCC 27755 D_formicigenerans-3.0.1_Cont39, whole genome shotgun sequence 68,009
NZ_AAXA02000004.1 Dorea formicigenerans ATCC 27755 D_formicigenerans-3.0.1_Cont17.1, whole genome shotgun sequence 40,801
NZ_AAXA02000005.1 Dorea formicigenerans ATCC 27755 D_formicigenerans-3.0.1_Cont15.1, whole genome shotgun sequence 50,427
NZ_AAXA02000006.1 Dorea formicigenerans ATCC 27755 D_formicigenerans-3.0.1_Cont394, whole genome shotgun sequence 106,634
NZ_AAXA02000007.1 Dorea formicigenerans ATCC 27755 D_formicigenerans-3.0.1_Cont393, whole genome shotgun sequence 99,643
NZ_AAXA02000008.1 Dorea formicigenerans ATCC 27755 D_formicigenerans-3.0.1_Cont395, whole genome shotgun sequence 93,858
NZ_AAXA02000009.1 Dorea formicigenerans ATCC 27755 D_formicigenerans-3.0.1_Cont328, whole genome shotgun sequence 212,918
NZ_AAXA02000010.1 Dorea formicigenerans ATCC 27755 D_formicigenerans-3.0.1_Cont150, whole genome shotgun sequence 230,467
NZ_AAXA02000011.1 Dorea formicigenerans ATCC 27755 D_formicigenerans-3.0.1_Cont326, whole genome shotgun sequence 207,272
NZ_AAXA02000012.1 Dorea formicigenerans ATCC 27755 D_formicigenerans-3.0.1_Cont36, whole genome shotgun sequence 189,117
NZ_AAXA02000013.1 Dorea formicigenerans ATCC 27755 D_formicigenerans-3.0.1_Cont327, whole genome shotgun sequence 318,591
NZ_AAXA02000014.1 Dorea formicigenerans ATCC 27755 D_formicigenerans-3.0.1_Cont390, whole genome shotgun sequence 372,750
NZ_AAXA02000015.1 Dorea formicigenerans ATCC 27755 D_formicigenerans-3.0.1_Cont399, whole genome shotgun sequence 957,115
NZ_AAXA02000016.1 Dorea formicigenerans ATCC 27755 D_formicigenerans-3.0.1_Cont400, whole genome shotgun sequence 199,077

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory