fast.genomicscompare 6,575 genera of bacteria & archaea

 

Lentisphaera araneosa HTCC2155

Genome identifier: GCF_000170755.1

NCBI assembly name: ASM17075v1

GTDB taxonomy: Bacteria, Verrucomicrobiota, Lentisphaeria, Lentisphaerales, Lentisphaeraceae, Lentisphaera, Lentisphaera araneosa

NCBI taxonomy: Bacteria, Lentisphaerota, Lentisphaeria, Lentisphaerales, Lentisphaeraceae, Lentisphaera, Lentisphaera araneosa

Scaffolds: 81

Genes: 4,972 Protein-coding: 4,843 RNAs: 73 pseudogenes: 56

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_ABCK01000001.1 Lentisphaera araneosa HTCC2155 1101329224563, whole genome shotgun sequence 439,085
NZ_ABCK01000002.1 Lentisphaera araneosa HTCC2155 1101329224571, whole genome shotgun sequence 370,643
NZ_ABCK01000003.1 Lentisphaera araneosa HTCC2155 1101329224559, whole genome shotgun sequence 345,896
NZ_ABCK01000004.1 Lentisphaera araneosa HTCC2155 1101329224553, whole genome shotgun sequence 342,512
NZ_ABCK01000005.1 Lentisphaera araneosa HTCC2155 1101329224556, whole genome shotgun sequence 339,923
NZ_ABCK01000006.1 Lentisphaera araneosa HTCC2155 1101329224557, whole genome shotgun sequence 331,808
NZ_ABCK01000007.1 Lentisphaera araneosa HTCC2155 1101329224533, whole genome shotgun sequence 327,870
NZ_ABCK01000008.1 Lentisphaera araneosa HTCC2155 1101329224567, whole genome shotgun sequence 210,656
NZ_ABCK01000009.1 Lentisphaera araneosa HTCC2155 1101329224545, whole genome shotgun sequence 203,801
NZ_ABCK01000010.1 Lentisphaera araneosa HTCC2155 1101329224568, whole genome shotgun sequence 191,946
NZ_ABCK01000011.1 Lentisphaera araneosa HTCC2155 1101329224561, whole genome shotgun sequence 187,038
NZ_ABCK01000012.1 Lentisphaera araneosa HTCC2155 1101329224548, whole genome shotgun sequence 186,208
NZ_ABCK01000013.1 Lentisphaera araneosa HTCC2155 1101329224547, whole genome shotgun sequence 165,945
NZ_ABCK01000014.1 Lentisphaera araneosa HTCC2155 1101329224564, whole genome shotgun sequence 164,689
NZ_ABCK01000015.1 Lentisphaera araneosa HTCC2155 1101329224535, whole genome shotgun sequence 153,182
NZ_ABCK01000016.1 Lentisphaera araneosa HTCC2155 1101329224546, whole genome shotgun sequence 124,766
NZ_ABCK01000017.1 Lentisphaera araneosa HTCC2155 1101329224566, whole genome shotgun sequence 124,062
NZ_ABCK01000018.1 Lentisphaera araneosa HTCC2155 1101329224574, whole genome shotgun sequence 115,432
NZ_ABCK01000019.1 Lentisphaera araneosa HTCC2155 1101329224562, whole genome shotgun sequence 98,508
NZ_ABCK01000020.1 Lentisphaera araneosa HTCC2155 1101329224544, whole genome shotgun sequence 97,206
NZ_ABCK01000021.1 Lentisphaera araneosa HTCC2155 1101329224565, whole genome shotgun sequence 92,091
NZ_ABCK01000022.1 Lentisphaera araneosa HTCC2155 1101329224549, whole genome shotgun sequence 87,880
NZ_ABCK01000023.1 Lentisphaera araneosa HTCC2155 1101329224534, whole genome shotgun sequence 79,360
NZ_ABCK01000024.1 Lentisphaera araneosa HTCC2155 1101329224525, whole genome shotgun sequence 77,807
NZ_ABCK01000025.1 Lentisphaera araneosa HTCC2155 1101329224558, whole genome shotgun sequence 75,330
NZ_ABCK01000026.1 Lentisphaera araneosa HTCC2155 1101329224577, whole genome shotgun sequence 70,386
NZ_ABCK01000027.1 Lentisphaera araneosa HTCC2155 1101329224551, whole genome shotgun sequence 65,074
NZ_ABCK01000028.1 Lentisphaera araneosa HTCC2155 1101329224572, whole genome shotgun sequence 62,179
NZ_ABCK01000029.1 Lentisphaera araneosa HTCC2155 1101329224578, whole genome shotgun sequence 61,148
NZ_ABCK01000030.1 Lentisphaera araneosa HTCC2155 1101329224554, whole genome shotgun sequence 58,982
NZ_ABCK01000031.1 Lentisphaera araneosa HTCC2155 1101329224570, whole genome shotgun sequence 58,943
NZ_ABCK01000032.1 Lentisphaera araneosa HTCC2155 1101329224528, whole genome shotgun sequence 55,288
NZ_ABCK01000033.1 Lentisphaera araneosa HTCC2155 1101329224576, whole genome shotgun sequence 53,586
NZ_ABCK01000034.1 Lentisphaera araneosa HTCC2155 1101329224538, whole genome shotgun sequence 53,228
NZ_ABCK01000035.1 Lentisphaera araneosa HTCC2155 1101329224575, whole genome shotgun sequence 50,350
NZ_ABCK01000036.1 Lentisphaera araneosa HTCC2155 1101329224405, whole genome shotgun sequence 45,000
NZ_ABCK01000037.1 Lentisphaera araneosa HTCC2155 1101329224555, whole genome shotgun sequence 40,229
NZ_ABCK01000038.1 Lentisphaera araneosa HTCC2155 1101329224523, whole genome shotgun sequence 35,935
NZ_ABCK01000039.1 Lentisphaera araneosa HTCC2155 1101329224539, whole genome shotgun sequence 35,577
NZ_ABCK01000040.1 Lentisphaera araneosa HTCC2155 1101329224550, whole genome shotgun sequence 34,227
NZ_ABCK01000041.1 Lentisphaera araneosa HTCC2155 1101329224537, whole genome shotgun sequence 26,712
NZ_ABCK01000042.1 Lentisphaera araneosa HTCC2155 1101329224524, whole genome shotgun sequence 26,135
NZ_ABCK01000043.1 Lentisphaera araneosa HTCC2155 1101329224541, whole genome shotgun sequence 24,615
NZ_ABCK01000044.1 Lentisphaera araneosa HTCC2155 1101329224320, whole genome shotgun sequence 19,246
NZ_ABCK01000045.1 Lentisphaera araneosa HTCC2155 1101329224569, whole genome shotgun sequence 17,992
NZ_ABCK01000046.1 Lentisphaera araneosa HTCC2155 1101329224573, whole genome shotgun sequence 16,019
NZ_ABCK01000047.1 Lentisphaera araneosa HTCC2155 1101329224560, whole genome shotgun sequence 15,691
NZ_ABCK01000048.1 Lentisphaera araneosa HTCC2155 1101329224496, whole genome shotgun sequence 15,677
NZ_ABCK01000049.1 Lentisphaera araneosa HTCC2155 1101329224530, whole genome shotgun sequence 13,153
NZ_ABCK01000050.1 Lentisphaera araneosa HTCC2155 1101329224330, whole genome shotgun sequence 12,573
NZ_ABCK01000051.1 Lentisphaera araneosa HTCC2155 1101329224361, whole genome shotgun sequence 12,140
NZ_ABCK01000052.1 Lentisphaera araneosa HTCC2155 1101329224420, whole genome shotgun sequence 10,598
NZ_ABCK01000053.1 Lentisphaera araneosa HTCC2155 1101329224536, whole genome shotgun sequence 10,295
NZ_ABCK01000054.1 Lentisphaera araneosa HTCC2155 1101329224527, whole genome shotgun sequence 10,222
NZ_ABCK01000055.1 Lentisphaera araneosa HTCC2155 1101329224497, whole genome shotgun sequence 8,543
NZ_ABCK01000056.1 Lentisphaera araneosa HTCC2155 1101329224531, whole genome shotgun sequence 8,450
NZ_ABCK01000057.1 Lentisphaera araneosa HTCC2155 1101329224552, whole genome shotgun sequence 8,256
NZ_ABCK01000058.1 Lentisphaera araneosa HTCC2155 1101329224419, whole genome shotgun sequence 4,901
NZ_ABCK01000059.1 Lentisphaera araneosa HTCC2155 1101329224532, whole genome shotgun sequence 4,388
NZ_ABCK01000060.1 Lentisphaera araneosa HTCC2155 1101329224540, whole genome shotgun sequence 4,317
NZ_ABCK01000061.1 Lentisphaera araneosa HTCC2155 1101329224526, whole genome shotgun sequence 3,864
NZ_ABCK01000062.1 Lentisphaera araneosa HTCC2155 1101329224529, whole genome shotgun sequence 3,383
NZ_ABCK01000063.1 Lentisphaera araneosa HTCC2155 1101329224543, whole genome shotgun sequence 3,339
NZ_ABCK01000064.1 Lentisphaera araneosa HTCC2155 1101329224542, whole genome shotgun sequence 3,161
NZ_ABCK01000065.1 Lentisphaera araneosa HTCC2155 1101329224343, whole genome shotgun sequence 3,051
NZ_ABCK01000066.1 Lentisphaera araneosa HTCC2155 1101329224447, whole genome shotgun sequence 2,555
NZ_ABCK01000067.1 Lentisphaera araneosa HTCC2155 1101329224400, whole genome shotgun sequence 1,602
NZ_ABCK01000068.1 Lentisphaera araneosa HTCC2155 1101329224464, whole genome shotgun sequence 1,497
NZ_ABCK01000069.1 Lentisphaera araneosa HTCC2155 1101329224396, whole genome shotgun sequence 1,473
NZ_ABCK01000070.1 Lentisphaera araneosa HTCC2155 1101329224406, whole genome shotgun sequence 1,459
NZ_ABCK01000071.1 Lentisphaera araneosa HTCC2155 1101329224399, whole genome shotgun sequence 1,409
NZ_ABCK01000072.1 Lentisphaera araneosa HTCC2155 1101329224442, whole genome shotgun sequence 1,379
NZ_ABCK01000073.1 Lentisphaera araneosa HTCC2155 1101329224512, whole genome shotgun sequence 1,369
NZ_ABCK01000074.1 Lentisphaera araneosa HTCC2155 1101329224371, whole genome shotgun sequence 1,324
NZ_ABCK01000075.1 Lentisphaera araneosa HTCC2155 1101329224435, whole genome shotgun sequence 1,307
NZ_ABCK01000076.1 Lentisphaera araneosa HTCC2155 1101329224368, whole genome shotgun sequence 1,286
NZ_ABCK01000077.1 Lentisphaera araneosa HTCC2155 1101329224493, whole genome shotgun sequence 1,280
NZ_ABCK01000078.1 Lentisphaera araneosa HTCC2155 1101329224482, whole genome shotgun sequence 1,258
NZ_ABCK01000079.1 Lentisphaera araneosa HTCC2155 1101329224346, whole genome shotgun sequence 1,222
NZ_ABCK01000080.1 Lentisphaera araneosa HTCC2155 1101329224329, whole genome shotgun sequence 1,182
NZ_ABCK01000081.1 Lentisphaera araneosa HTCC2155 1101329224473, whole genome shotgun sequence 1,081

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory