fast.genomicscompare 6,575 genera of bacteria & archaea

 

Pyramidobacter piscolens W5455

Genome identifier: GCF_000177335.1

NCBI assembly name: ASM17733v1

GTDB taxonomy: Bacteria, Synergistota, Synergistia, Synergistales, Dethiosulfovibrionaceae, Pyramidobacter, Pyramidobacter piscolens

NCBI taxonomy: Bacteria, Synergistota, Synergistia, Synergistales, Dethiosulfovibrionaceae, Pyramidobacter, Pyramidobacter piscolens

Scaffolds: 140

Genes: 2,478 Protein-coding: 2,375 RNAs: 62 pseudogenes: 41

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_ADFP01000001.1 Pyramidobacter piscolens W5455 contig00277, whole genome shotgun sequence 6,112
NZ_ADFP01000002.1 Pyramidobacter piscolens W5455 contig00033, whole genome shotgun sequence 2,362
NZ_ADFP01000003.1 Pyramidobacter piscolens W5455 contig00239, whole genome shotgun sequence 514
NZ_ADFP01000004.1 Pyramidobacter piscolens W5455 contig00268, whole genome shotgun sequence 19,216
NZ_ADFP01000005.1 Pyramidobacter piscolens W5455 contig00072, whole genome shotgun sequence 1,106
NZ_ADFP01000006.1 Pyramidobacter piscolens W5455 contig00252, whole genome shotgun sequence 11,477
NZ_ADFP01000007.1 Pyramidobacter piscolens W5455 contig00019, whole genome shotgun sequence 26,049
NZ_ADFP01000008.1 Pyramidobacter piscolens W5455 contig00275, whole genome shotgun sequence 5,386
NZ_ADFP01000009.1 Pyramidobacter piscolens W5455 contig00017, whole genome shotgun sequence 39,826
NZ_ADFP01000010.1 Pyramidobacter piscolens W5455 contig00045, whole genome shotgun sequence 18,564
NZ_ADFP01000011.1 Pyramidobacter piscolens W5455 contig00056, whole genome shotgun sequence 56,273
NZ_ADFP01000012.1 Pyramidobacter piscolens W5455 contig00228, whole genome shotgun sequence 989
NZ_ADFP01000013.1 Pyramidobacter piscolens W5455 contig00028, whole genome shotgun sequence 5,909
NZ_ADFP01000014.1 Pyramidobacter piscolens W5455 contig00245, whole genome shotgun sequence 30,179
NZ_ADFP01000015.1 Pyramidobacter piscolens W5455 contig00058, whole genome shotgun sequence 14,408
NZ_ADFP01000016.1 Pyramidobacter piscolens W5455 contig00021, whole genome shotgun sequence 32,428
NZ_ADFP01000017.1 Pyramidobacter piscolens W5455 contig00259, whole genome shotgun sequence 9,951
NZ_ADFP01000018.1 Pyramidobacter piscolens W5455 contig00238, whole genome shotgun sequence 1,053
NZ_ADFP01000019.1 Pyramidobacter piscolens W5455 contig00032, whole genome shotgun sequence 20,815
NZ_ADFP01000020.1 Pyramidobacter piscolens W5455 contig00036, whole genome shotgun sequence 2,464
NZ_ADFP01000021.1 Pyramidobacter piscolens W5455 contig00012, whole genome shotgun sequence 15,358
NZ_ADFP01000022.1 Pyramidobacter piscolens W5455 contig00081, whole genome shotgun sequence 1,081
NZ_ADFP01000023.1 Pyramidobacter piscolens W5455 contig00243, whole genome shotgun sequence 43,011
NZ_ADFP01000024.1 Pyramidobacter piscolens W5455 contig00256, whole genome shotgun sequence 42,940
NZ_ADFP01000025.1 Pyramidobacter piscolens W5455 contig00066, whole genome shotgun sequence 7,578
NZ_ADFP01000026.1 Pyramidobacter piscolens W5455 contig00030, whole genome shotgun sequence 1,096
NZ_ADFP01000027.1 Pyramidobacter piscolens W5455 contig00288, whole genome shotgun sequence 3,286
NZ_ADFP01000028.1 Pyramidobacter piscolens W5455 contig00264, whole genome shotgun sequence 25,637
NZ_ADFP01000029.1 Pyramidobacter piscolens W5455 contig00059, whole genome shotgun sequence 10,164
NZ_ADFP01000030.1 Pyramidobacter piscolens W5455 contig00016, whole genome shotgun sequence 12,762
NZ_ADFP01000031.1 Pyramidobacter piscolens W5455 contig00287, whole genome shotgun sequence 23,580
NZ_ADFP01000032.1 Pyramidobacter piscolens W5455 contig00224, whole genome shotgun sequence 729
NZ_ADFP01000033.1 Pyramidobacter piscolens W5455 contig00061, whole genome shotgun sequence 3,026
NZ_ADFP01000034.1 Pyramidobacter piscolens W5455 contig00251, whole genome shotgun sequence 15,978
NZ_ADFP01000035.1 Pyramidobacter piscolens W5455 contig00074, whole genome shotgun sequence 993
NZ_ADFP01000036.1 Pyramidobacter piscolens W5455 contig00233, whole genome shotgun sequence 561
NZ_ADFP01000037.1 Pyramidobacter piscolens W5455 contig00079, whole genome shotgun sequence 1,442
NZ_ADFP01000038.1 Pyramidobacter piscolens W5455 contig00063, whole genome shotgun sequence 7,454
NZ_ADFP01000039.1 Pyramidobacter piscolens W5455 contig00068, whole genome shotgun sequence 58,328
NZ_ADFP01000040.1 Pyramidobacter piscolens W5455 contig00290, whole genome shotgun sequence 3,291
NZ_ADFP01000041.1 Pyramidobacter piscolens W5455 contig00279, whole genome shotgun sequence 14,905
NZ_ADFP01000042.1 Pyramidobacter piscolens W5455 contig00001, whole genome shotgun sequence 819
NZ_ADFP01000043.1 Pyramidobacter piscolens W5455 contig00018, whole genome shotgun sequence 12,393
NZ_ADFP01000044.1 Pyramidobacter piscolens W5455 contig00260, whole genome shotgun sequence 37,387
NZ_ADFP01000045.1 Pyramidobacter piscolens W5455 contig00225, whole genome shotgun sequence 773
NZ_ADFP01000046.1 Pyramidobacter piscolens W5455 contig00285, whole genome shotgun sequence 29,893
NZ_ADFP01000047.1 Pyramidobacter piscolens W5455 contig00015, whole genome shotgun sequence 125,203
NZ_ADFP01000048.1 Pyramidobacter piscolens W5455 contig00262, whole genome shotgun sequence 3,344
NZ_ADFP01000049.1 Pyramidobacter piscolens W5455 contig00070, whole genome shotgun sequence 39,065
NZ_ADFP01000050.1 Pyramidobacter piscolens W5455 contig00050, whole genome shotgun sequence 25,216
NZ_ADFP01000051.1 Pyramidobacter piscolens W5455 contig00025, whole genome shotgun sequence 95,701
NZ_ADFP01000052.1 Pyramidobacter piscolens W5455 contig00291, whole genome shotgun sequence 988
NZ_ADFP01000053.1 Pyramidobacter piscolens W5455 contig00274, whole genome shotgun sequence 24,675
NZ_ADFP01000054.1 Pyramidobacter piscolens W5455 contig00254, whole genome shotgun sequence 29,720
NZ_ADFP01000055.1 Pyramidobacter piscolens W5455 contig00281, whole genome shotgun sequence 27,187
NZ_ADFP01000056.1 Pyramidobacter piscolens W5455 contig00271, whole genome shotgun sequence 20,613
NZ_ADFP01000057.1 Pyramidobacter piscolens W5455 contig00082, whole genome shotgun sequence 1,106
NZ_ADFP01000058.1 Pyramidobacter piscolens W5455 contig00024, whole genome shotgun sequence 3,536
NZ_ADFP01000059.1 Pyramidobacter piscolens W5455 contig00246, whole genome shotgun sequence 38,674
NZ_ADFP01000060.1 Pyramidobacter piscolens W5455 contig00276, whole genome shotgun sequence 556
NZ_ADFP01000061.1 Pyramidobacter piscolens W5455 contig00048, whole genome shotgun sequence 32,359
NZ_ADFP01000062.1 Pyramidobacter piscolens W5455 contig00009, whole genome shotgun sequence 25,167
NZ_ADFP01000063.1 Pyramidobacter piscolens W5455 contig00248, whole genome shotgun sequence 7,029
NZ_ADFP01000064.1 Pyramidobacter piscolens W5455 contig00038, whole genome shotgun sequence 44,589
NZ_ADFP01000065.1 Pyramidobacter piscolens W5455 contig00267, whole genome shotgun sequence 536
NZ_ADFP01000066.1 Pyramidobacter piscolens W5455 contig00044, whole genome shotgun sequence 18,884
NZ_ADFP01000067.1 Pyramidobacter piscolens W5455 contig00006, whole genome shotgun sequence 847
NZ_ADFP01000068.1 Pyramidobacter piscolens W5455 contig00034, whole genome shotgun sequence 2,242
NZ_ADFP01000069.1 Pyramidobacter piscolens W5455 contig00022, whole genome shotgun sequence 36,608
NZ_ADFP01000070.1 Pyramidobacter piscolens W5455 contig00064, whole genome shotgun sequence 2,763
NZ_ADFP01000071.1 Pyramidobacter piscolens W5455 contig00008, whole genome shotgun sequence 64,734
NZ_ADFP01000072.1 Pyramidobacter piscolens W5455 contig00027, whole genome shotgun sequence 23,628
NZ_ADFP01000073.1 Pyramidobacter piscolens W5455 contig00093, whole genome shotgun sequence 703
NZ_ADFP01000074.1 Pyramidobacter piscolens W5455 contig00269, whole genome shotgun sequence 25,861
NZ_ADFP01000075.1 Pyramidobacter piscolens W5455 contig00249, whole genome shotgun sequence 31,397
NZ_ADFP01000076.1 Pyramidobacter piscolens W5455 contig00073, whole genome shotgun sequence 1,486
NZ_ADFP01000077.1 Pyramidobacter piscolens W5455 contig00075, whole genome shotgun sequence 1,772
NZ_ADFP01000078.1 Pyramidobacter piscolens W5455 contig00062, whole genome shotgun sequence 5,412
NZ_ADFP01000079.1 Pyramidobacter piscolens W5455 contig00258, whole genome shotgun sequence 69,741
NZ_ADFP01000080.1 Pyramidobacter piscolens W5455 contig00265, whole genome shotgun sequence 506
NZ_ADFP01000081.1 Pyramidobacter piscolens W5455 contig00241, whole genome shotgun sequence 1,222
NZ_ADFP01000082.1 Pyramidobacter piscolens W5455 contig00253, whole genome shotgun sequence 28,783
NZ_ADFP01000083.1 Pyramidobacter piscolens W5455 contig00011, whole genome shotgun sequence 8,307
NZ_ADFP01000084.1 Pyramidobacter piscolens W5455 contig00263, whole genome shotgun sequence 50,003
NZ_ADFP01000085.1 Pyramidobacter piscolens W5455 contig00240, whole genome shotgun sequence 1,102
NZ_ADFP01000086.1 Pyramidobacter piscolens W5455 contig00049, whole genome shotgun sequence 72,365
NZ_ADFP01000087.1 Pyramidobacter piscolens W5455 contig00257, whole genome shotgun sequence 3,246
NZ_ADFP01000088.1 Pyramidobacter piscolens W5455 contig00235, whole genome shotgun sequence 606
NZ_ADFP01000089.1 Pyramidobacter piscolens W5455 contig00080, whole genome shotgun sequence 753
NZ_ADFP01000090.1 Pyramidobacter piscolens W5455 contig00283, whole genome shotgun sequence 38,731
NZ_ADFP01000091.1 Pyramidobacter piscolens W5455 contig00273, whole genome shotgun sequence 10,900
NZ_ADFP01000092.1 Pyramidobacter piscolens W5455 contig00051, whole genome shotgun sequence 9,265
NZ_ADFP01000093.1 Pyramidobacter piscolens W5455 contig00040, whole genome shotgun sequence 46,354
NZ_ADFP01000094.1 Pyramidobacter piscolens W5455 contig00065, whole genome shotgun sequence 7,074
NZ_ADFP01000095.1 Pyramidobacter piscolens W5455 contig00247, whole genome shotgun sequence 30,692
NZ_ADFP01000096.1 Pyramidobacter piscolens W5455 contig00013, whole genome shotgun sequence 1,831
NZ_ADFP01000097.1 Pyramidobacter piscolens W5455 contig00042, whole genome shotgun sequence 53,111
NZ_ADFP01000098.1 Pyramidobacter piscolens W5455 contig00053, whole genome shotgun sequence 9,259
NZ_ADFP01000099.1 Pyramidobacter piscolens W5455 contig00057, whole genome shotgun sequence 6,638
NZ_ADFP01000100.1 Pyramidobacter piscolens W5455 contig00046, whole genome shotgun sequence 24,084
NZ_ADFP01000101.1 Pyramidobacter piscolens W5455 contig00067, whole genome shotgun sequence 10,065
NZ_ADFP01000102.1 Pyramidobacter piscolens W5455 contig00020, whole genome shotgun sequence 14,432
NZ_ADFP01000103.1 Pyramidobacter piscolens W5455 contig00055, whole genome shotgun sequence 12,311
NZ_ADFP01000104.1 Pyramidobacter piscolens W5455 contig00071, whole genome shotgun sequence 6,710
NZ_ADFP01000105.1 Pyramidobacter piscolens W5455 contig00069, whole genome shotgun sequence 18,039
NZ_ADFP01000106.1 Pyramidobacter piscolens W5455 contig00286, whole genome shotgun sequence 7,990
NZ_ADFP01000107.1 Pyramidobacter piscolens W5455 contig00236, whole genome shotgun sequence 1,203
NZ_ADFP01000108.1 Pyramidobacter piscolens W5455 contig00266, whole genome shotgun sequence 509
NZ_ADFP01000109.1 Pyramidobacter piscolens W5455 contig00293, whole genome shotgun sequence 509
NZ_ADFP01000110.1 Pyramidobacter piscolens W5455 contig00031, whole genome shotgun sequence 3,649
NZ_ADFP01000111.1 Pyramidobacter piscolens W5455 contig00250, whole genome shotgun sequence 2,707
NZ_ADFP01000112.1 Pyramidobacter piscolens W5455 contig00026, whole genome shotgun sequence 4,587
NZ_ADFP01000113.1 Pyramidobacter piscolens W5455 contig00278, whole genome shotgun sequence 15,425
NZ_ADFP01000114.1 Pyramidobacter piscolens W5455 contig00029, whole genome shotgun sequence 6,063
NZ_ADFP01000115.1 Pyramidobacter piscolens W5455 contig00270, whole genome shotgun sequence 5,569
NZ_ADFP01000116.1 Pyramidobacter piscolens W5455 contig00284, whole genome shotgun sequence 16,793
NZ_ADFP01000117.1 Pyramidobacter piscolens W5455 contig00041, whole genome shotgun sequence 13,305
NZ_ADFP01000118.1 Pyramidobacter piscolens W5455 contig00078, whole genome shotgun sequence 1,464
NZ_ADFP01000119.1 Pyramidobacter piscolens W5455 contig00227, whole genome shotgun sequence 510
NZ_ADFP01000120.1 Pyramidobacter piscolens W5455 contig00060, whole genome shotgun sequence 13,041
NZ_ADFP01000121.1 Pyramidobacter piscolens W5455 contig00280, whole genome shotgun sequence 80,239
NZ_ADFP01000122.1 Pyramidobacter piscolens W5455 contig00054, whole genome shotgun sequence 11,530
NZ_ADFP01000123.1 Pyramidobacter piscolens W5455 contig00272, whole genome shotgun sequence 48,399
NZ_ADFP01000124.1 Pyramidobacter piscolens W5455 contig00043, whole genome shotgun sequence 70,558
NZ_ADFP01000125.1 Pyramidobacter piscolens W5455 contig00023, whole genome shotgun sequence 2,013
NZ_ADFP01000126.1 Pyramidobacter piscolens W5455 contig00047, whole genome shotgun sequence 19,110
NZ_ADFP01000127.1 Pyramidobacter piscolens W5455 contig00014, whole genome shotgun sequence 14,087
NZ_ADFP01000128.1 Pyramidobacter piscolens W5455 contig00255, whole genome shotgun sequence 33,453
NZ_ADFP01000129.1 Pyramidobacter piscolens W5455 contig00007, whole genome shotgun sequence 32,244
NZ_ADFP01000130.1 Pyramidobacter piscolens W5455 contig00230, whole genome shotgun sequence 749
NZ_ADFP01000131.1 Pyramidobacter piscolens W5455 contig00037, whole genome shotgun sequence 8,671
NZ_ADFP01000132.1 Pyramidobacter piscolens W5455 contig00003, whole genome shotgun sequence 762
NZ_ADFP01000133.1 Pyramidobacter piscolens W5455 contig00244, whole genome shotgun sequence 12,107
NZ_ADFP01000134.1 Pyramidobacter piscolens W5455 contig00052, whole genome shotgun sequence 15,806
NZ_ADFP01000135.1 Pyramidobacter piscolens W5455 contig00010, whole genome shotgun sequence 101,906
NZ_ADFP01000136.1 Pyramidobacter piscolens W5455 contig00261, whole genome shotgun sequence 3,185
NZ_ADFP01000137.1 Pyramidobacter piscolens W5455 contig00039, whole genome shotgun sequence 18,184
NZ_ADFP01000138.1 Pyramidobacter piscolens W5455 contig00004, whole genome shotgun sequence 525
NZ_ADFP01000139.1 Pyramidobacter piscolens W5455 contig00035, whole genome shotgun sequence 2,567
NZ_ADFP01000140.1 Pyramidobacter piscolens W5455 contig00282, whole genome shotgun sequence 15,318

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory