fast.genomicscompare 6,575 genera of bacteria & archaea

 

Odyssella thessalonicensis L13

Genome identifier: GCF_000190415.1

NCBI assembly name: ASM19041v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Paracaedibacterales, Paracaedibacteraceae, Odyssella, Odyssella thessalonicensis

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Holosporales, Candidatus Paracaedibacteraceae, Candidatus Odyssella, Candidatus Odyssella thessalonicensis

Scaffolds: 20

Genes: 2,503 Protein-coding: 2,426 RNAs: 47 pseudogenes: 30

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_AEWF01000001.1 Candidatus Odyssella thessalonicensis L13 HMO_scaffold00006, whole genome shotgun sequence 721,931
NZ_AEWF01000002.1 Candidatus Odyssella thessalonicensis L13 HMO_scaffold00019, whole genome shotgun sequence 390,080
NZ_AEWF01000003.1 Candidatus Odyssella thessalonicensis L13 HMO_scaffold00009, whole genome shotgun sequence 388,114
NZ_AEWF01000004.1 Candidatus Odyssella thessalonicensis L13 HMO_scaffold00007, whole genome shotgun sequence 382,682
NZ_AEWF01000005.1 Candidatus Odyssella thessalonicensis L13 HMO_scaffold00016, whole genome shotgun sequence 187,902
NZ_AEWF01000006.1 Candidatus Odyssella thessalonicensis L13 HMO_scaffold00002, whole genome shotgun sequence 170,935
NZ_AEWF01000007.1 Candidatus Odyssella thessalonicensis L13 HMO_scaffold00003, whole genome shotgun sequence 162,889
NZ_AEWF01000008.1 Candidatus Odyssella thessalonicensis L13 HMO_scaffold00011, whole genome shotgun sequence 81,738
NZ_AEWF01000009.1 Candidatus Odyssella thessalonicensis L13 HMO_scaffold00004, whole genome shotgun sequence 77,882
NZ_AEWF01000010.1 Candidatus Odyssella thessalonicensis L13 HMO_scaffold00005, whole genome shotgun sequence 76,305
NZ_AEWF01000011.1 Candidatus Odyssella thessalonicensis L13 HMO_scaffold00018, whole genome shotgun sequence 61,755
NZ_AEWF01000012.1 Candidatus Odyssella thessalonicensis L13 HMO_scaffold00017, whole genome shotgun sequence 53,318
NZ_AEWF01000013.1 Candidatus Odyssella thessalonicensis L13 HMO_scaffold00001, whole genome shotgun sequence 32,187
NZ_AEWF01000014.1 Candidatus Odyssella thessalonicensis L13 HMO_scaffold00012, whole genome shotgun sequence 17,427
NZ_AEWF01000015.1 Candidatus Odyssella thessalonicensis L13 HMO_scaffold00008, whole genome shotgun sequence 16,981
NZ_AEWF01000016.1 Candidatus Odyssella thessalonicensis L13 HMO_scaffold00013, whole genome shotgun sequence 13,295
NZ_AEWF01000017.1 Candidatus Odyssella thessalonicensis L13 HMO_scaffold00020, whole genome shotgun sequence 3,424
NZ_AEWF01000018.1 Candidatus Odyssella thessalonicensis L13 HMO_scaffold00010, whole genome shotgun sequence 3,195
NZ_AEWF01000019.1 Candidatus Odyssella thessalonicensis L13 HMO_scaffold00015, whole genome shotgun sequence 3,008
NZ_AEWF01000020.1 Candidatus Odyssella thessalonicensis L13 HMO_scaffold00014, whole genome shotgun sequence 2,600

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory