fast.genomicscompare 6,575 genera of bacteria & archaea

 

Polymorphum gilvum SL003B-26A1

Genome identifier: GCF_000192745.1

NCBI assembly name: ASM19274v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhizobiales, Stappiaceae, Polymorphum, Polymorphum gilvum

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Paracoccaceae, Polymorphum, Polymorphum gilvum

Scaffolds: 2

Genes: 4,499 Protein-coding: 4,398 RNAs: 60 pseudogenes: 41

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NC_015258.1 Polymorphum gilvum SL003B-26A1 plasmid pSL003B, complete sequence 69,598
NC_015259.1 Polymorphum gilvum SL003B-26A1, complete sequence 4,649,365

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory