fast.genomicscompare 6,575 genera of bacteria & archaea

 

Ruminococcus_F champanellensis 18P13

Genome identifier: GCF_000210095.1

NCBI assembly name: ASM21009v1

GTDB taxonomy: Bacteria, Bacillota_A, Clostridia, Oscillospirales, Ruminococcaceae, Ruminococcus_F, Ruminococcus_F champanellensis

NCBI taxonomy: Bacteria, Bacillota, Clostridia, Eubacteriales, Oscillospiraceae, Ruminococcus, Ruminococcus champanellensis

Scaffolds: 1

Genes: 2,395 Protein-coding: 2,320 RNAs: 51 pseudogenes: 24

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NC_021039.1 Ruminococcus champanellensis 18P13 = JCM 17042, complete sequence 2,573,208

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory