fast.genomicscompare 6,575 genera of bacteria & archaea

 

Dysgonomonas gadei ATCC BAA-286

Genome identifier: GCF_000213555.1

NCBI assembly name: Dysg_gade_ATCC_V1

GTDB taxonomy: Bacteria, Bacteroidota, Bacteroidia, Bacteroidales, Dysgonomonadaceae, Dysgonomonas, Dysgonomonas gadei

NCBI taxonomy: Bacteria, Bacteroidota, Bacteroidia, Bacteroidales, Dysgonomonadaceae, Dysgonomonas, Dysgonomonas gadei

Scaffolds: 25

Genes: 4,136 Protein-coding: 4,038 RNAs: 53 pseudogenes: 45

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_GL891979.1 Dysgonomonas gadei ATCC BAA-286 supercont1.1, whole genome shotgun sequence 1,016,930
NZ_GL891980.1 Dysgonomonas gadei ATCC BAA-286 supercont1.2, whole genome shotgun sequence 716,230
NZ_GL891981.1 Dysgonomonas gadei ATCC BAA-286 supercont1.3, whole genome shotgun sequence 467,011
NZ_GL891982.1 Dysgonomonas gadei ATCC BAA-286 supercont1.4, whole genome shotgun sequence 413,047
NZ_GL891983.1 Dysgonomonas gadei ATCC BAA-286 supercont1.5, whole genome shotgun sequence 396,291
NZ_GL891984.1 Dysgonomonas gadei ATCC BAA-286 supercont1.6, whole genome shotgun sequence 310,672
NZ_GL891985.1 Dysgonomonas gadei ATCC BAA-286 supercont1.7, whole genome shotgun sequence 296,346
NZ_GL891986.1 Dysgonomonas gadei ATCC BAA-286 supercont1.8, whole genome shotgun sequence 291,086
NZ_GL891987.1 Dysgonomonas gadei ATCC BAA-286 supercont1.9, whole genome shotgun sequence 275,405
NZ_GL891988.1 Dysgonomonas gadei ATCC BAA-286 supercont1.10, whole genome shotgun sequence 180,982
NZ_GL891989.1 Dysgonomonas gadei ATCC BAA-286 supercont1.11, whole genome shotgun sequence 150,117
NZ_GL891990.1 Dysgonomonas gadei ATCC BAA-286 supercont1.12, whole genome shotgun sequence 132,140
NZ_GL891991.1 Dysgonomonas gadei ATCC BAA-286 supercont1.13, whole genome shotgun sequence 115,251
NZ_GL891992.1 Dysgonomonas gadei ATCC BAA-286 supercont1.14, whole genome shotgun sequence 100,178
NZ_GL891993.1 Dysgonomonas gadei ATCC BAA-286 supercont1.15, whole genome shotgun sequence 96,650
NZ_GL891994.1 Dysgonomonas gadei ATCC BAA-286 supercont1.16, whole genome shotgun sequence 76,150
NZ_GL891995.1 Dysgonomonas gadei ATCC BAA-286 supercont1.17, whole genome shotgun sequence 75,677
NZ_GL891996.1 Dysgonomonas gadei ATCC BAA-286 supercont1.18, whole genome shotgun sequence 36,572
NZ_GL891997.1 Dysgonomonas gadei ATCC BAA-286 supercont1.19, whole genome shotgun sequence 20,947
NZ_GL891998.1 Dysgonomonas gadei ATCC BAA-286 supercont1.20, whole genome shotgun sequence 2,669
NZ_GL891999.1 Dysgonomonas gadei ATCC BAA-286 supercont1.21, whole genome shotgun sequence 1,350
NZ_GL892000.1 Dysgonomonas gadei ATCC BAA-286 supercont1.22, whole genome shotgun sequence 1,306
NZ_GL892001.1 Dysgonomonas gadei ATCC BAA-286 supercont1.23, whole genome shotgun sequence 1,213
NZ_GL892002.1 Dysgonomonas gadei ATCC BAA-286 supercont1.24, whole genome shotgun sequence 1,086
NZ_GL892003.1 Dysgonomonas gadei ATCC BAA-286 supercont1.25, whole genome shotgun sequence 781

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory