fast.genomicscompare 6,575 genera of bacteria & archaea

 

Centipeda periodontii DSM 2778

Genome identifier: GCF_000213975.1

NCBI assembly name: ASM21397v1

GTDB taxonomy: Bacteria, Bacillota_C, Negativicutes, Selenomonadales, Selenomonadaceae, Centipeda, Centipeda periodontii

NCBI taxonomy: Bacteria, Bacillota, Negativicutes, Selenomonadales, Selenomonadaceae, Centipeda, Centipeda periodontii

Scaffolds: 10

Genes: 2,644 Protein-coding: 2,509 RNAs: 65 pseudogenes: 70

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_GL892076.1 Centipeda periodontii DSM 2778 SCAFFOLD1, whole genome shotgun sequence 2,749,943
NZ_GL892077.1 Centipeda periodontii DSM 2778 SCAFFOLD2, whole genome shotgun sequence 4,242
NZ_GL892078.1 Centipeda periodontii DSM 2778 SCAFFOLD3, whole genome shotgun sequence 1,468
NZ_GL892079.1 Centipeda periodontii DSM 2778 SCAFFOLD4, whole genome shotgun sequence 1,244
NZ_GL892080.1 Centipeda periodontii DSM 2778 SCAFFOLD5, whole genome shotgun sequence 1,186
NZ_GL892081.1 Centipeda periodontii DSM 2778 SCAFFOLD6, whole genome shotgun sequence 1,008
NZ_GL892082.1 Centipeda periodontii DSM 2778 SCAFFOLD7, whole genome shotgun sequence 613
NZ_GL892083.1 Centipeda periodontii DSM 2778 SCAFFOLD8, whole genome shotgun sequence 531
NZ_GL892084.1 Centipeda periodontii DSM 2778 SCAFFOLD9, whole genome shotgun sequence 527
NZ_GL892085.1 Centipeda periodontii DSM 2778 SCAFFOLD10, whole genome shotgun sequence 500

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory