fast.genomicscompare 6,575 genera of bacteria & archaea

 

Ochrovirga pacifica S85

Genome identifier: GCF_000220525.1

NCBI assembly name: ASM22052v2

GTDB taxonomy: Bacteria, Bacteroidota, Bacteroidia, Flavobacteriales, Flavobacteriaceae, Ochrovirga, Ochrovirga pacifica

NCBI taxonomy: Bacteria, Bacteroidota, Flavobacteriia, Flavobacteriales, Flavobacteriaceae, Ochrovirga, Ochrovirga pacifica

Scaffolds: 77

Genes: 2,889 Protein-coding: 2,822 RNAs: 56 pseudogenes: 11

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_AFPK01000001.1 Ochrovirga pacifica strain S85 contig00003, whole genome shotgun sequence 25,407
NZ_AFPK01000002.1 Ochrovirga pacifica strain S85 contig00004, whole genome shotgun sequence 22,703
NZ_AFPK01000003.1 Ochrovirga pacifica strain S85 contig00006, whole genome shotgun sequence 743
NZ_AFPK01000004.1 Ochrovirga pacifica strain S85 contig00007, whole genome shotgun sequence 19,387
NZ_AFPK01000005.1 Ochrovirga pacifica strain S85 contig00008, whole genome shotgun sequence 105,437
NZ_AFPK01000006.1 Ochrovirga pacifica strain S85 contig00009, whole genome shotgun sequence 3,120
NZ_AFPK01000007.1 Ochrovirga pacifica strain S85 contig00010, whole genome shotgun sequence 619
NZ_AFPK01000008.1 Ochrovirga pacifica strain S85 contig00011, whole genome shotgun sequence 722
NZ_AFPK01000009.1 Ochrovirga pacifica strain S85 contig00012, whole genome shotgun sequence 595
NZ_AFPK01000010.1 Ochrovirga pacifica strain S85 contig00013, whole genome shotgun sequence 7,562
NZ_AFPK01000011.1 Ochrovirga pacifica strain S85 contig00014, whole genome shotgun sequence 19,281
NZ_AFPK01000012.1 Ochrovirga pacifica strain S85 contig00015, whole genome shotgun sequence 4,892
NZ_AFPK01000013.1 Ochrovirga pacifica strain S85 contig00016, whole genome shotgun sequence 107,567
NZ_AFPK01000014.1 Ochrovirga pacifica strain S85 contig00017, whole genome shotgun sequence 226,263
NZ_AFPK01000015.1 Ochrovirga pacifica strain S85 contig00018, whole genome shotgun sequence 41,207
NZ_AFPK01000016.1 Ochrovirga pacifica strain S85 contig00019, whole genome shotgun sequence 42,046
NZ_AFPK01000017.1 Ochrovirga pacifica strain S85 contig00020, whole genome shotgun sequence 10,660
NZ_AFPK01000018.1 Ochrovirga pacifica strain S85 contig00021, whole genome shotgun sequence 45,459
NZ_AFPK01000019.1 Ochrovirga pacifica strain S85 contig00022, whole genome shotgun sequence 20,043
NZ_AFPK01000020.1 Ochrovirga pacifica strain S85 contig00023, whole genome shotgun sequence 17,836
NZ_AFPK01000021.1 Ochrovirga pacifica strain S85 contig00024, whole genome shotgun sequence 2,021
NZ_AFPK01000022.1 Ochrovirga pacifica strain S85 contig00025, whole genome shotgun sequence 40,071
NZ_AFPK01000023.1 Ochrovirga pacifica strain S85 contig00026, whole genome shotgun sequence 1,361
NZ_AFPK01000024.1 Ochrovirga pacifica strain S85 contig00027, whole genome shotgun sequence 46,245
NZ_AFPK01000025.1 Ochrovirga pacifica strain S85 contig00028, whole genome shotgun sequence 22,248
NZ_AFPK01000026.1 Ochrovirga pacifica strain S85 contig00029, whole genome shotgun sequence 161,258
NZ_AFPK01000027.1 Ochrovirga pacifica strain S85 contig00030, whole genome shotgun sequence 45,866
NZ_AFPK01000028.1 Ochrovirga pacifica strain S85 contig00031, whole genome shotgun sequence 65,521
NZ_AFPK01000029.1 Ochrovirga pacifica strain S85 contig00032, whole genome shotgun sequence 246,784
NZ_AFPK01000030.1 Ochrovirga pacifica strain S85 contig00033, whole genome shotgun sequence 2,149
NZ_AFPK01000031.1 Ochrovirga pacifica strain S85 contig00034, whole genome shotgun sequence 14,980
NZ_AFPK01000032.1 Ochrovirga pacifica strain S85 contig00035, whole genome shotgun sequence 23,213
NZ_AFPK01000033.1 Ochrovirga pacifica strain S85 contig00036, whole genome shotgun sequence 507
NZ_AFPK01000034.1 Ochrovirga pacifica strain S85 contig00037, whole genome shotgun sequence 120,926
NZ_AFPK01000035.1 Ochrovirga pacifica strain S85 contig00038, whole genome shotgun sequence 115,674
NZ_AFPK01000036.1 Ochrovirga pacifica strain S85 contig00039, whole genome shotgun sequence 133,969
NZ_AFPK01000037.1 Ochrovirga pacifica strain S85 contig00040, whole genome shotgun sequence 31,089
NZ_AFPK01000038.1 Ochrovirga pacifica strain S85 contig00041, whole genome shotgun sequence 55,927
NZ_AFPK01000039.1 Ochrovirga pacifica strain S85 contig00042, whole genome shotgun sequence 39,554
NZ_AFPK01000040.1 Ochrovirga pacifica strain S85 contig00043, whole genome shotgun sequence 60,681
NZ_AFPK01000041.1 Ochrovirga pacifica strain S85 contig00044, whole genome shotgun sequence 4,372
NZ_AFPK01000042.1 Ochrovirga pacifica strain S85 contig00045, whole genome shotgun sequence 45,948
NZ_AFPK01000043.1 Ochrovirga pacifica strain S85 contig00046, whole genome shotgun sequence 109,333
NZ_AFPK01000044.1 Ochrovirga pacifica strain S85 contig00047, whole genome shotgun sequence 155,815
NZ_AFPK01000045.1 Ochrovirga pacifica strain S85 contig00048, whole genome shotgun sequence 73,534
NZ_AFPK01000046.1 Ochrovirga pacifica strain S85 contig00049, whole genome shotgun sequence 50,487
NZ_AFPK01000047.1 Ochrovirga pacifica strain S85 contig00050, whole genome shotgun sequence 5,732
NZ_AFPK01000048.1 Ochrovirga pacifica strain S85 contig00051, whole genome shotgun sequence 20,054
NZ_AFPK01000049.1 Ochrovirga pacifica strain S85 contig00052, whole genome shotgun sequence 33,163
NZ_AFPK01000050.1 Ochrovirga pacifica strain S85 contig00053, whole genome shotgun sequence 3,522
NZ_AFPK01000051.1 Ochrovirga pacifica strain S85 contig00054, whole genome shotgun sequence 4,863
NZ_AFPK01000052.1 Ochrovirga pacifica strain S85 contig00055, whole genome shotgun sequence 11,601
NZ_AFPK01000053.1 Ochrovirga pacifica strain S85 contig00056, whole genome shotgun sequence 4,201
NZ_AFPK01000054.1 Ochrovirga pacifica strain S85 contig00057, whole genome shotgun sequence 1,138
NZ_AFPK01000055.1 Ochrovirga pacifica strain S85 contig00059, whole genome shotgun sequence 601
NZ_AFPK01000056.1 Ochrovirga pacifica strain S85 contig00061, whole genome shotgun sequence 1,296
NZ_AFPK01000057.1 Ochrovirga pacifica strain S85 contig00062, whole genome shotgun sequence 8,779
NZ_AFPK01000058.1 Ochrovirga pacifica strain S85 contig00063, whole genome shotgun sequence 1,568
NZ_AFPK01000059.1 Ochrovirga pacifica strain S85 contig00064, whole genome shotgun sequence 3,455
NZ_AFPK01000060.1 Ochrovirga pacifica strain S85 contig00065, whole genome shotgun sequence 3,620
NZ_AFPK01000061.1 Ochrovirga pacifica strain S85 contig00066, whole genome shotgun sequence 1,336
NZ_AFPK01000062.1 Ochrovirga pacifica strain S85 contig00067, whole genome shotgun sequence 110,162
NZ_AFPK01000063.1 Ochrovirga pacifica strain S85 contig00068, whole genome shotgun sequence 126,189
NZ_AFPK01000064.1 Ochrovirga pacifica strain S85 contig00069, whole genome shotgun sequence 33,148
NZ_AFPK01000065.1 Ochrovirga pacifica strain S85 contig00071, whole genome shotgun sequence 52,376
NZ_AFPK01000066.1 Ochrovirga pacifica strain S85 contig00072, whole genome shotgun sequence 50,907
NZ_AFPK01000067.1 Ochrovirga pacifica strain S85 contig00073, whole genome shotgun sequence 74,669
NZ_AFPK01000068.1 Ochrovirga pacifica strain S85 contig00074, whole genome shotgun sequence 85,956
NZ_AFPK01000069.1 Ochrovirga pacifica strain S85 contig00075, whole genome shotgun sequence 25,573
NZ_AFPK01000070.1 Ochrovirga pacifica strain S85 contig00076, whole genome shotgun sequence 62,140
NZ_AFPK01000071.1 Ochrovirga pacifica strain S85 contig00077, whole genome shotgun sequence 97,134
NZ_AFPK01000072.1 Ochrovirga pacifica strain S85 contig00078, whole genome shotgun sequence 60,789
NZ_AFPK01000073.1 Ochrovirga pacifica strain S85 contig00079, whole genome shotgun sequence 586
NZ_AFPK01000074.1 Ochrovirga pacifica strain S85 contig00080, whole genome shotgun sequence 105,634
NZ_AFPK01000075.1 Ochrovirga pacifica strain S85 contig00081, whole genome shotgun sequence 927
NZ_AFPK01000076.1 Ochrovirga pacifica strain S85 contig00090, whole genome shotgun sequence 1,473
NZ_AFPK01000077.1 Ochrovirga pacifica strain S85 contig00091, whole genome shotgun sequence 955

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory