fast.genomicscompare 6,575 genera of bacteria & archaea

 

Ketogulonicigenium vulgare WSH-001

Genome identifier: GCF_000223375.1

NCBI assembly name: ASM22337v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Rhodobacteraceae, Ketogulonicigenium, Ketogulonicigenium vulgare

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Roseobacteraceae, Ketogulonicigenium, Ketogulonicigenium vulgare

Scaffolds: 3

Genes: 3,235 Protein-coding: 3,128 RNAs: 76 pseudogenes: 31

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NC_017384.1 Ketogulonicigenium vulgare WSH-001, complete sequence 2,766,400
NC_017385.1 Ketogulonicigenium vulgare WSH-001 plasmid 2, complete sequence 242,715
NC_017386.1 Ketogulonicigenium vulgare WSH-001 plasmid 1, complete sequence 267,986

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory