fast.genomicscompare 6,575 genera of bacteria & archaea

 

Pelagibacterium halotolerans B2

Genome identifier: GCF_000230555.1

NCBI assembly name: ASM23055v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhizobiales, Devosiaceae, Pelagibacterium, Pelagibacterium halotolerans

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Hyphomicrobiales, Devosiaceae, Pelagibacterium, Pelagibacterium halotolerans

Scaffolds: 2

Genes: 3,875 Protein-coding: 3,784 RNAs: 57 pseudogenes: 34

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NC_016078.1 Pelagibacterium halotolerans B2, complete sequence 3,944,837
NC_016079.1 Pelagibacterium halotolerans B2 plasmid pPHB2, complete sequence 4,050

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory