fast.genomicscompare 6,575 genera of bacteria & archaea

 

Commensalibacter intestini A911

Genome identifier: GCF_000231445.1

NCBI assembly name: ASM23144v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Acetobacterales, Acetobacteraceae, Commensalibacter, Commensalibacter intestini

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodospirillales, Acetobacteraceae, Commensalibacter, Commensalibacter intestini

Scaffolds: 26

Genes: 2,286 Protein-coding: 2,218 RNAs: 50 pseudogenes: 18

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_AGFR01000001.1 Commensalibacter intestini A911 74_1, whole genome shotgun sequence 66,368
NZ_AGFR01000002.1 Commensalibacter intestini A911 74_2, whole genome shotgun sequence 12,514
NZ_AGFR01000003.1 Commensalibacter intestini A911 74_3, whole genome shotgun sequence 971,375
NZ_AGFR01000004.1 Commensalibacter intestini A911 74_4, whole genome shotgun sequence 1,622
NZ_AGFR01000005.1 Commensalibacter intestini A911 74_5, whole genome shotgun sequence 56,538
NZ_AGFR01000006.1 Commensalibacter intestini A911 74_6, whole genome shotgun sequence 611
NZ_AGFR01000007.1 Commensalibacter intestini A911 74_7, whole genome shotgun sequence 476,138
NZ_AGFR01000008.1 Commensalibacter intestini A911 74_8, whole genome shotgun sequence 1,732
NZ_AGFR01000009.1 Commensalibacter intestini A911 74_9, whole genome shotgun sequence 459,781
NZ_AGFR01000010.1 Commensalibacter intestini A911 74_10, whole genome shotgun sequence 143,931
NZ_AGFR01000011.1 Commensalibacter intestini A911 74_11, whole genome shotgun sequence 756
NZ_AGFR01000012.1 Commensalibacter intestini A911 74_12, whole genome shotgun sequence 117,798
NZ_AGFR01000013.1 Commensalibacter intestini A911 74_13, whole genome shotgun sequence 34,778
NZ_AGFR01000014.1 Commensalibacter intestini A911 74_14, whole genome shotgun sequence 33,292
NZ_AGFR01000015.1 Commensalibacter intestini A911 74_15, whole genome shotgun sequence 2,858
NZ_AGFR01000016.1 Commensalibacter intestini A911 74_16, whole genome shotgun sequence 678
NZ_AGFR01000017.1 Commensalibacter intestini A911 74_17, whole genome shotgun sequence 927
NZ_AGFR01000018.1 Commensalibacter intestini A911 74_18, whole genome shotgun sequence 35,408
NZ_AGFR01000019.1 Commensalibacter intestini A911 74_19, whole genome shotgun sequence 1,621
NZ_AGFR01000020.1 Commensalibacter intestini A911 74_20, whole genome shotgun sequence 10,194
NZ_AGFR01000021.1 Commensalibacter intestini A911 74_21, whole genome shotgun sequence 10,324
NZ_AGFR01000022.1 Commensalibacter intestini A911 74_22, whole genome shotgun sequence 7,487
NZ_AGFR01000023.1 Commensalibacter intestini A911 74_23, whole genome shotgun sequence 4,392
NZ_AGFR01000024.1 Commensalibacter intestini A911 74_24, whole genome shotgun sequence 701
NZ_AGFR01000025.1 Commensalibacter intestini A911 74_25, whole genome shotgun sequence 2,166
NZ_AGFR01000026.1 Commensalibacter intestini A911 74_26, whole genome shotgun sequence 788

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory