fast.genomicscompare 6,575 genera of bacteria & archaea

 

Johnsonella ignava ATCC 51276

Genome identifier: GCF_000235445.1

NCBI assembly name: John_igna_ATCC_51276_V1

GTDB taxonomy: Bacteria, Bacillota_A, Clostridia, Lachnospirales, Lachnospiraceae, Johnsonella, Johnsonella ignava

NCBI taxonomy: Bacteria, Bacillota, Clostridia, Eubacteriales, Lachnospiraceae, Johnsonella, Johnsonella ignava

Scaffolds: 43

Genes: 2,422 Protein-coding: 2,275 RNAs: 63 pseudogenes: 84

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JH378829.1 Johnsonella ignava ATCC 51276 supercont1.1, whole genome shotgun sequence 560,346
NZ_JH378830.1 Johnsonella ignava ATCC 51276 supercont1.2, whole genome shotgun sequence 453,313
NZ_JH378831.1 Johnsonella ignava ATCC 51276 supercont1.3, whole genome shotgun sequence 337,562
NZ_JH378832.1 Johnsonella ignava ATCC 51276 supercont1.4, whole genome shotgun sequence 298,581
NZ_JH378833.1 Johnsonella ignava ATCC 51276 supercont1.5, whole genome shotgun sequence 211,345
NZ_JH378834.1 Johnsonella ignava ATCC 51276 supercont1.6, whole genome shotgun sequence 121,023
NZ_JH378835.1 Johnsonella ignava ATCC 51276 supercont1.7, whole genome shotgun sequence 116,388
NZ_JH378836.1 Johnsonella ignava ATCC 51276 supercont1.8, whole genome shotgun sequence 111,096
NZ_JH378837.1 Johnsonella ignava ATCC 51276 supercont1.9, whole genome shotgun sequence 74,615
NZ_JH378838.1 Johnsonella ignava ATCC 51276 supercont1.10, whole genome shotgun sequence 71,821
NZ_JH378839.1 Johnsonella ignava ATCC 51276 supercont1.11, whole genome shotgun sequence 63,447
NZ_JH378840.1 Johnsonella ignava ATCC 51276 supercont1.12, whole genome shotgun sequence 55,393
NZ_JH378841.1 Johnsonella ignava ATCC 51276 supercont1.13, whole genome shotgun sequence 50,665
NZ_JH378842.1 Johnsonella ignava ATCC 51276 supercont1.14, whole genome shotgun sequence 40,671
NZ_JH378843.1 Johnsonella ignava ATCC 51276 supercont1.15, whole genome shotgun sequence 30,570
NZ_JH378844.1 Johnsonella ignava ATCC 51276 supercont1.16, whole genome shotgun sequence 28,647
NZ_JH378845.1 Johnsonella ignava ATCC 51276 supercont1.17, whole genome shotgun sequence 20,626
NZ_JH378846.1 Johnsonella ignava ATCC 51276 supercont1.18, whole genome shotgun sequence 6,175
NZ_JH378847.1 Johnsonella ignava ATCC 51276 supercont1.19, whole genome shotgun sequence 4,500
NZ_JH378848.1 Johnsonella ignava ATCC 51276 supercont1.20, whole genome shotgun sequence 2,841
NZ_JH378849.1 Johnsonella ignava ATCC 51276 supercont1.21, whole genome shotgun sequence 2,204
NZ_JH378850.1 Johnsonella ignava ATCC 51276 supercont1.22, whole genome shotgun sequence 2,111
NZ_JH378851.1 Johnsonella ignava ATCC 51276 supercont1.23, whole genome shotgun sequence 1,784
NZ_JH378852.1 Johnsonella ignava ATCC 51276 supercont1.24, whole genome shotgun sequence 1,654
NZ_JH378853.1 Johnsonella ignava ATCC 51276 supercont1.25, whole genome shotgun sequence 1,644
NZ_JH378854.1 Johnsonella ignava ATCC 51276 supercont1.26, whole genome shotgun sequence 1,595
NZ_JH378855.1 Johnsonella ignava ATCC 51276 supercont1.27, whole genome shotgun sequence 1,501
NZ_JH378856.1 Johnsonella ignava ATCC 51276 supercont1.28, whole genome shotgun sequence 1,455
NZ_JH378857.1 Johnsonella ignava ATCC 51276 supercont1.29, whole genome shotgun sequence 1,406
NZ_JH378858.1 Johnsonella ignava ATCC 51276 supercont1.30, whole genome shotgun sequence 1,323
NZ_JH378859.1 Johnsonella ignava ATCC 51276 supercont1.31, whole genome shotgun sequence 1,228
NZ_JH378860.1 Johnsonella ignava ATCC 51276 supercont1.32, whole genome shotgun sequence 1,219
NZ_JH378861.1 Johnsonella ignava ATCC 51276 supercont1.33, whole genome shotgun sequence 1,126
NZ_JH378862.1 Johnsonella ignava ATCC 51276 supercont1.34, whole genome shotgun sequence 896
NZ_JH378863.1 Johnsonella ignava ATCC 51276 supercont1.35, whole genome shotgun sequence 823
NZ_JH378864.1 Johnsonella ignava ATCC 51276 supercont1.36, whole genome shotgun sequence 815
NZ_JH378865.1 Johnsonella ignava ATCC 51276 supercont1.37, whole genome shotgun sequence 782
NZ_JH378866.1 Johnsonella ignava ATCC 51276 supercont1.38, whole genome shotgun sequence 764
NZ_JH378867.1 Johnsonella ignava ATCC 51276 supercont1.39, whole genome shotgun sequence 723
NZ_JH378868.1 Johnsonella ignava ATCC 51276 supercont1.40, whole genome shotgun sequence 662
NZ_JH378869.1 Johnsonella ignava ATCC 51276 supercont1.41, whole genome shotgun sequence 661
NZ_JH378870.1 Johnsonella ignava ATCC 51276 supercont1.42, whole genome shotgun sequence 538
NZ_JH378871.1 Johnsonella ignava ATCC 51276 supercont1.43, whole genome shotgun sequence 536

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory