fast.genomicscompare 6,575 genera of bacteria & archaea

 

Metallosphaera yellowstonensis MK1

Genome identifier: GCF_000243315.1

NCBI assembly name: ASM24331v1

GTDB taxonomy: Archaea, Thermoproteota, Thermoprotei_A, Sulfolobales, Sulfolobaceae, Metallosphaera, Metallosphaera yellowstonensis

NCBI taxonomy: Archaea, Thermoproteota, Thermoprotei, Sulfolobales, Sulfolobaceae, Metallosphaera, Metallosphaera yellowstonensis

Scaffolds: 21

Genes: 3,309 Protein-coding: 2,907 RNAs: 53 pseudogenes: 349

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JH597752.1 Metallosphaera yellowstonensis MK1 MetMK1scaffold_1, whole genome shotgun sequence 3,504
NZ_JH597753.1 Metallosphaera yellowstonensis MK1 MetMK1scaffold_2, whole genome shotgun sequence 5,245
NZ_JH597754.1 Metallosphaera yellowstonensis MK1 MetMK1scaffold_3, whole genome shotgun sequence 2,226
NZ_JH597755.1 Metallosphaera yellowstonensis MK1 MetMK1scaffold_4, whole genome shotgun sequence 96,796
NZ_JH597756.1 Metallosphaera yellowstonensis MK1 MetMK1scaffold_5, whole genome shotgun sequence 2,201
NZ_JH597757.1 Metallosphaera yellowstonensis MK1 MetMK1scaffold_6, whole genome shotgun sequence 2,499
NZ_JH597758.1 Metallosphaera yellowstonensis MK1 MetMK1scaffold_7, whole genome shotgun sequence 22,179
NZ_JH597759.1 Metallosphaera yellowstonensis MK1 MetMK1scaffold_8, whole genome shotgun sequence 2,865
NZ_JH597760.1 Metallosphaera yellowstonensis MK1 MetMK1scaffold_9, whole genome shotgun sequence 8,212
NZ_JH597761.1 Metallosphaera yellowstonensis MK1 MetMK1scaffold_10, whole genome shotgun sequence 1,258,398
NZ_JH597762.1 Metallosphaera yellowstonensis MK1 MetMK1scaffold_11, whole genome shotgun sequence 2,157
NZ_JH597763.1 Metallosphaera yellowstonensis MK1 MetMK1scaffold_12, whole genome shotgun sequence 2,173
NZ_JH597764.1 Metallosphaera yellowstonensis MK1 MetMK1scaffold_13, whole genome shotgun sequence 6,978
NZ_JH597765.1 Metallosphaera yellowstonensis MK1 MetMK1scaffold_14, whole genome shotgun sequence 7,603
NZ_JH597766.1 Metallosphaera yellowstonensis MK1 MetMK1scaffold_15, whole genome shotgun sequence 2,993
NZ_JH597767.1 Metallosphaera yellowstonensis MK1 MetMK1scaffold_16, whole genome shotgun sequence 5,450
NZ_JH597768.1 Metallosphaera yellowstonensis MK1 MetMK1scaffold_17, whole genome shotgun sequence 562,910
NZ_JH597769.1 Metallosphaera yellowstonensis MK1 MetMK1scaffold_18, whole genome shotgun sequence 2,198
NZ_JH597770.1 Metallosphaera yellowstonensis MK1 MetMK1scaffold_19, whole genome shotgun sequence 813,727
NZ_JH597771.1 Metallosphaera yellowstonensis MK1 MetMK1scaffold_20, whole genome shotgun sequence 3,921
NZ_JH597772.1 Metallosphaera yellowstonensis MK1 MetMK1scaffold_21, whole genome shotgun sequence 3,217

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory