fast.genomicscompare 6,575 genera of bacteria & archaea

 

Joostella marina DSM 19592

Genome identifier: GCF_000260115.1

NCBI assembly name: ASM26011v1

GTDB taxonomy: Bacteria, Bacteroidota, Bacteroidia, Flavobacteriales, Flavobacteriaceae, Joostella, Joostella marina

NCBI taxonomy: Bacteria, Bacteroidota, Flavobacteriia, Flavobacteriales, Flavobacteriaceae, Joostella, Joostella marina

Scaffolds: 2

Genes: 3,937 Protein-coding: 3,837 RNAs: 58 pseudogenes: 42

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JH651379.1 Galbibacter orientalis DSM 19592 Joomascaffold_1, whole genome shotgun sequence 3,950,031
NZ_JH651380.1 Galbibacter orientalis DSM 19592 Joomascaffold_2, whole genome shotgun sequence 558,212

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory