fast.genomicscompare 6,575 genera of bacteria & archaea

 

Imtechella halotolerans K1

Genome identifier: GCF_000260835.1

NCBI assembly name: ASM26083v1

GTDB taxonomy: Bacteria, Bacteroidota, Bacteroidia, Flavobacteriales, Flavobacteriaceae, Imtechella, Imtechella halotolerans

NCBI taxonomy: Bacteria, Bacteroidota, Flavobacteriia, Flavobacteriales, Flavobacteriaceae, Imtechella, Imtechella halotolerans

Scaffolds: 44

Genes: 2,741 Protein-coding: 2,687 RNAs: 44 pseudogenes: 10

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_AJJU01000001.1 Imtechella halotolerans K1 Contig1, whole genome shotgun sequence 11,436
NZ_AJJU01000002.1 Imtechella halotolerans K1 Contig2, whole genome shotgun sequence 691,666
NZ_AJJU01000003.1 Imtechella halotolerans K1 Contig3, whole genome shotgun sequence 406,375
NZ_AJJU01000004.1 Imtechella halotolerans K1 Contig4, whole genome shotgun sequence 354,279
NZ_AJJU01000005.1 Imtechella halotolerans K1 Contig5, whole genome shotgun sequence 53,088
NZ_AJJU01000006.1 Imtechella halotolerans K1 Contig6, whole genome shotgun sequence 136,289
NZ_AJJU01000007.1 Imtechella halotolerans K1 Contig7, whole genome shotgun sequence 62,917
NZ_AJJU01000008.1 Imtechella halotolerans K1 Contig8, whole genome shotgun sequence 68,160
NZ_AJJU01000009.1 Imtechella halotolerans K1 Contig9, whole genome shotgun sequence 111,392
NZ_AJJU01000010.1 Imtechella halotolerans K1 Contig10, whole genome shotgun sequence 142,949
NZ_AJJU01000011.1 Imtechella halotolerans K1 Contig11, whole genome shotgun sequence 83,927
NZ_AJJU01000012.1 Imtechella halotolerans K1 Contig12, whole genome shotgun sequence 2,599
NZ_AJJU01000013.1 Imtechella halotolerans K1 Contig13, whole genome shotgun sequence 38,348
NZ_AJJU01000014.1 Imtechella halotolerans K1 Contig14, whole genome shotgun sequence 40,975
NZ_AJJU01000015.1 Imtechella halotolerans K1 Contig15, whole genome shotgun sequence 9,657
NZ_AJJU01000016.1 Imtechella halotolerans K1 Contig16, whole genome shotgun sequence 5,469
NZ_AJJU01000017.1 Imtechella halotolerans K1 Contig17, whole genome shotgun sequence 100,207
NZ_AJJU01000018.1 Imtechella halotolerans K1 Contig18, whole genome shotgun sequence 39,804
NZ_AJJU01000019.1 Imtechella halotolerans K1 Contig19, whole genome shotgun sequence 41,645
NZ_AJJU01000020.1 Imtechella halotolerans K1 Contig20, whole genome shotgun sequence 17,654
NZ_AJJU01000021.1 Imtechella halotolerans K1 Contig21, whole genome shotgun sequence 7,974
NZ_AJJU01000022.1 Imtechella halotolerans K1 Contig22, whole genome shotgun sequence 10,293
NZ_AJJU01000023.1 Imtechella halotolerans K1 Contig23, whole genome shotgun sequence 69,993
NZ_AJJU01000024.1 Imtechella halotolerans K1 Contig24, whole genome shotgun sequence 239
NZ_AJJU01000025.1 Imtechella halotolerans K1 Contig25, whole genome shotgun sequence 280
NZ_AJJU01000026.1 Imtechella halotolerans K1 Contig26, whole genome shotgun sequence 3,935
NZ_AJJU01000027.1 Imtechella halotolerans K1 Contig27, whole genome shotgun sequence 236
NZ_AJJU01000028.1 Imtechella halotolerans K1 Contig28, whole genome shotgun sequence 778
NZ_AJJU01000029.1 Imtechella halotolerans K1 Contig29, whole genome shotgun sequence 4,933
NZ_AJJU01000030.1 Imtechella halotolerans K1 Contig30, whole genome shotgun sequence 691
NZ_AJJU01000031.1 Imtechella halotolerans K1 Contig31, whole genome shotgun sequence 4,017
NZ_AJJU01000032.1 Imtechella halotolerans K1 Contig32, whole genome shotgun sequence 30,227
NZ_AJJU01000033.1 Imtechella halotolerans K1 Contig33, whole genome shotgun sequence 4,889
NZ_AJJU01000034.1 Imtechella halotolerans K1 Contig34, whole genome shotgun sequence 79,562
NZ_AJJU01000035.1 Imtechella halotolerans K1 Contig35, whole genome shotgun sequence 489
NZ_AJJU01000036.1 Imtechella halotolerans K1 Contig36, whole genome shotgun sequence 9,011
NZ_AJJU01000037.1 Imtechella halotolerans K1 Contig37, whole genome shotgun sequence 337,071
NZ_AJJU01000038.1 Imtechella halotolerans K1 Contig38, whole genome shotgun sequence 28,662
NZ_AJJU01000039.1 Imtechella halotolerans K1 Contig39, whole genome shotgun sequence 367
NZ_AJJU01000040.1 Imtechella halotolerans K1 Contig40, whole genome shotgun sequence 35,132
NZ_AJJU01000041.1 Imtechella halotolerans K1 Contig41, whole genome shotgun sequence 11,933
NZ_AJJU01000042.1 Imtechella halotolerans K1 Contig42, whole genome shotgun sequence 4,112
NZ_AJJU01000043.1 Imtechella halotolerans K1 Contig43, whole genome shotgun sequence 22,941
NZ_AJJU01000044.1 Imtechella halotolerans K1 Contig44, whole genome shotgun sequence 350

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory