fast.genomicscompare 6,575 genera of bacteria & archaea

 

Methylophaga frappieri JAM7

Genome identifier: GCF_000260965.1

NCBI assembly name: ASM26096v1

GTDB taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, Nitrosococcales, Methylophagaceae, Methylophaga, Methylophaga frappieri

NCBI taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, Thiotrichales, Piscirickettsiaceae, Methylophaga, Methylophaga frappieri

Scaffolds: 2

Genes: 2,661 Protein-coding: 2,591 RNAs: 54 pseudogenes: 16

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NC_017856.1 Methylophaga frappieri, complete sequence 2,697,465
NC_017858.1 Methylophaga frappieri plasmid unnamed, complete sequence 47,825

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory