fast.genomicscompare 6,575 genera of bacteria & archaea

 

Bartonella_B tamiae Th239

Genome identifier: GCF_000278275.1

NCBI assembly name: Bart_tami_Th239_V1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhizobiales, Rhizobiaceae, Bartonella_B, Bartonella_B tamiae

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Hyphomicrobiales, Bartonellaceae, Bartonella, Bartonella tamiae

Scaffolds: 3

Genes: 2,044 Protein-coding: 1,938 RNAs: 56 pseudogenes: 50

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JH725147.1 Bartonella tamiae Th239 supercont1.1, whole genome shotgun sequence 2,251,792
NZ_JH725148.1 Bartonella tamiae Th239 supercont1.2, whole genome shotgun sequence 6,580
NZ_JH725149.1 Bartonella tamiae Th239 supercont1.3, whole genome shotgun sequence 2,420

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory