fast.genomicscompare 6,575 genera of bacteria & archaea

 

Bradyrhizobium japonicum USDA 6

Genome identifier: GCF_000284375.1

NCBI assembly name: ASM28437v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhizobiales, Xanthobacteraceae, Bradyrhizobium, Bradyrhizobium japonicum

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Hyphomicrobiales, Nitrobacteraceae, Bradyrhizobium, Bradyrhizobium japonicum

Scaffolds: 1

Genes: 8,774 Protein-coding: 8,438 RNAs: 66 pseudogenes: 270

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NC_017249.1 Bradyrhizobium japonicum USDA 6, complete sequence 9,207,384

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory