fast.genomicscompare 6,575 genera of bacteria & archaea

 

Oceanibaculum indicum P24

Genome identifier: GCF_000299935.1

NCBI assembly name: ASM29993v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Oceanibaculales, Oceanibaculaceae, Oceanibaculum, Oceanibaculum indicum

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodospirillales, Thalassobaculaceae, Oceanibaculum, Oceanibaculum indicum

Scaffolds: 71

Genes: 3,841 Protein-coding: 3,763 RNAs: 49 pseudogenes: 29

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_AMRL01000001.1 Oceanibaculum indicum P24 contig1, whole genome shotgun sequence 423,231
NZ_AMRL01000002.1 Oceanibaculum indicum P24 contig2, whole genome shotgun sequence 303,154
NZ_AMRL01000003.1 Oceanibaculum indicum P24 contig3, whole genome shotgun sequence 240,389
NZ_AMRL01000004.1 Oceanibaculum indicum P24 contig4, whole genome shotgun sequence 196,148
NZ_AMRL01000005.1 Oceanibaculum indicum P24 contig5, whole genome shotgun sequence 192,524
NZ_AMRL01000006.1 Oceanibaculum indicum P24 contig6, whole genome shotgun sequence 178,217
NZ_AMRL01000007.1 Oceanibaculum indicum P24 contig7, whole genome shotgun sequence 168,457
NZ_AMRL01000008.1 Oceanibaculum indicum P24 contig8, whole genome shotgun sequence 142,429
NZ_AMRL01000009.1 Oceanibaculum indicum P24 contig9, whole genome shotgun sequence 132,026
NZ_AMRL01000010.1 Oceanibaculum indicum P24 contig10, whole genome shotgun sequence 120,187
NZ_AMRL01000011.1 Oceanibaculum indicum P24 contig11, whole genome shotgun sequence 110,049
NZ_AMRL01000012.1 Oceanibaculum indicum P24 contig12, whole genome shotgun sequence 109,956
NZ_AMRL01000013.1 Oceanibaculum indicum P24 contig13, whole genome shotgun sequence 107,757
NZ_AMRL01000014.1 Oceanibaculum indicum P24 contig14, whole genome shotgun sequence 105,047
NZ_AMRL01000015.1 Oceanibaculum indicum P24 contig15, whole genome shotgun sequence 92,131
NZ_AMRL01000016.1 Oceanibaculum indicum P24 contig16, whole genome shotgun sequence 74,913
NZ_AMRL01000017.1 Oceanibaculum indicum P24 contig17, whole genome shotgun sequence 74,166
NZ_AMRL01000018.1 Oceanibaculum indicum P24 contig18, whole genome shotgun sequence 72,212
NZ_AMRL01000019.1 Oceanibaculum indicum P24 contig19, whole genome shotgun sequence 70,676
NZ_AMRL01000020.1 Oceanibaculum indicum P24 contig20, whole genome shotgun sequence 66,485
NZ_AMRL01000021.1 Oceanibaculum indicum P24 contig21, whole genome shotgun sequence 65,908
NZ_AMRL01000022.1 Oceanibaculum indicum P24 contig22, whole genome shotgun sequence 63,556
NZ_AMRL01000023.1 Oceanibaculum indicum P24 contig23, whole genome shotgun sequence 62,913
NZ_AMRL01000024.1 Oceanibaculum indicum P24 contig24, whole genome shotgun sequence 60,689
NZ_AMRL01000025.1 Oceanibaculum indicum P24 contig25, whole genome shotgun sequence 51,403
NZ_AMRL01000026.1 Oceanibaculum indicum P24 contig26, whole genome shotgun sequence 51,191
NZ_AMRL01000027.1 Oceanibaculum indicum P24 contig27, whole genome shotgun sequence 46,687
NZ_AMRL01000028.1 Oceanibaculum indicum P24 contig28, whole genome shotgun sequence 43,499
NZ_AMRL01000029.1 Oceanibaculum indicum P24 contig29, whole genome shotgun sequence 42,979
NZ_AMRL01000030.1 Oceanibaculum indicum P24 contig30, whole genome shotgun sequence 36,327
NZ_AMRL01000031.1 Oceanibaculum indicum P24 contig31, whole genome shotgun sequence 35,264
NZ_AMRL01000032.1 Oceanibaculum indicum P24 contig32, whole genome shotgun sequence 34,622
NZ_AMRL01000033.1 Oceanibaculum indicum P24 contig33, whole genome shotgun sequence 30,813
NZ_AMRL01000034.1 Oceanibaculum indicum P24 contig34, whole genome shotgun sequence 29,126
NZ_AMRL01000035.1 Oceanibaculum indicum P24 contig35, whole genome shotgun sequence 27,269
NZ_AMRL01000036.1 Oceanibaculum indicum P24 contig36, whole genome shotgun sequence 26,375
NZ_AMRL01000037.1 Oceanibaculum indicum P24 contig37, whole genome shotgun sequence 24,708
NZ_AMRL01000038.1 Oceanibaculum indicum P24 contig38, whole genome shotgun sequence 23,937
NZ_AMRL01000039.1 Oceanibaculum indicum P24 contig39, whole genome shotgun sequence 23,802
NZ_AMRL01000040.1 Oceanibaculum indicum P24 contig40, whole genome shotgun sequence 21,396
NZ_AMRL01000041.1 Oceanibaculum indicum P24 contig41, whole genome shotgun sequence 20,715
NZ_AMRL01000042.1 Oceanibaculum indicum P24 contig42, whole genome shotgun sequence 17,364
NZ_AMRL01000043.1 Oceanibaculum indicum P24 contig43, whole genome shotgun sequence 15,732
NZ_AMRL01000044.1 Oceanibaculum indicum P24 contig44, whole genome shotgun sequence 14,514
NZ_AMRL01000045.1 Oceanibaculum indicum P24 contig45, whole genome shotgun sequence 11,531
NZ_AMRL01000046.1 Oceanibaculum indicum P24 contig46, whole genome shotgun sequence 10,275
NZ_AMRL01000047.1 Oceanibaculum indicum P24 contig47, whole genome shotgun sequence 9,348
NZ_AMRL01000048.1 Oceanibaculum indicum P24 contig48, whole genome shotgun sequence 8,907
NZ_AMRL01000049.1 Oceanibaculum indicum P24 contig49, whole genome shotgun sequence 8,325
NZ_AMRL01000050.1 Oceanibaculum indicum P24 contig50, whole genome shotgun sequence 6,433
NZ_AMRL01000051.1 Oceanibaculum indicum P24 contig51, whole genome shotgun sequence 6,131
NZ_AMRL01000052.1 Oceanibaculum indicum P24 contig52, whole genome shotgun sequence 5,475
NZ_AMRL01000053.1 Oceanibaculum indicum P24 contig53, whole genome shotgun sequence 5,287
NZ_AMRL01000054.1 Oceanibaculum indicum P24 contig54, whole genome shotgun sequence 3,137
NZ_AMRL01000055.1 Oceanibaculum indicum P24 contig55, whole genome shotgun sequence 3,130
NZ_AMRL01000056.1 Oceanibaculum indicum P24 contig56, whole genome shotgun sequence 3,107
NZ_AMRL01000057.1 Oceanibaculum indicum P24 contig57, whole genome shotgun sequence 2,351
NZ_AMRL01000058.1 Oceanibaculum indicum P24 contig58, whole genome shotgun sequence 1,998
NZ_AMRL01000059.1 Oceanibaculum indicum P24 contig59, whole genome shotgun sequence 1,979
NZ_AMRL01000060.1 Oceanibaculum indicum P24 contig60, whole genome shotgun sequence 1,890
NZ_AMRL01000061.1 Oceanibaculum indicum P24 contig61, whole genome shotgun sequence 1,785
NZ_AMRL01000062.1 Oceanibaculum indicum P24 contig62, whole genome shotgun sequence 1,486
NZ_AMRL01000063.1 Oceanibaculum indicum P24 contig63, whole genome shotgun sequence 1,293
NZ_AMRL01000064.1 Oceanibaculum indicum P24 contig64, whole genome shotgun sequence 1,280
NZ_AMRL01000065.1 Oceanibaculum indicum P24 contig65, whole genome shotgun sequence 1,199
NZ_AMRL01000066.1 Oceanibaculum indicum P24 contig66, whole genome shotgun sequence 1,183
NZ_AMRL01000067.1 Oceanibaculum indicum P24 contig67, whole genome shotgun sequence 1,171
NZ_AMRL01000068.1 Oceanibaculum indicum P24 contig68, whole genome shotgun sequence 944
NZ_AMRL01000069.1 Oceanibaculum indicum P24 contig69, whole genome shotgun sequence 943
NZ_AMRL01000070.1 Oceanibaculum indicum P24 contig70, whole genome shotgun sequence 720
NZ_AMRL01000071.1 Oceanibaculum indicum P24 contig71, whole genome shotgun sequence 541

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory