fast.genomicscompare 6,575 genera of bacteria & archaea

 

Bergeyella zoohelcum ATCC 43767

Genome identifier: GCF_000301075.1

NCBI assembly name: Berg_zooh_ATCC_43767_V1

GTDB taxonomy: Bacteria, Bacteroidota, Bacteroidia, Flavobacteriales, Weeksellaceae, Bergeyella, Bergeyella zoohelcum

NCBI taxonomy: Bacteria, Bacteroidota, Flavobacteriia, Flavobacteriales, Weeksellaceae, Bergeyella, Bergeyella zoohelcum

Scaffolds: 7

Genes: 2,161 Protein-coding: 2,069 RNAs: 49 pseudogenes: 43

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JH932293.1 Bergeyella zoohelcum ATCC 43767 supercont1.1, whole genome shotgun sequence 2,280,027
NZ_JH932294.1 Bergeyella zoohelcum ATCC 43767 supercont1.2, whole genome shotgun sequence 24,540
NZ_JH932295.1 Bergeyella zoohelcum ATCC 43767 supercont1.3, whole genome shotgun sequence 16,320
NZ_JH932296.1 Bergeyella zoohelcum ATCC 43767 supercont1.4, whole genome shotgun sequence 5,524
NZ_JH932297.1 Bergeyella zoohelcum ATCC 43767 supercont1.5, whole genome shotgun sequence 2,320
NZ_JH932298.1 Bergeyella zoohelcum ATCC 43767 supercont1.6, whole genome shotgun sequence 2,320
NZ_JH932299.1 Bergeyella zoohelcum ATCC 43767 supercont1.7, whole genome shotgun sequence 1,733

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory