fast.genomicscompare 6,575 genera of bacteria & archaea

 

Spirulina_A subsalsa PCC 9445

Genome identifier: GCF_000314005.1

NCBI assembly name: ASM31400v1

GTDB taxonomy: Bacteria, Cyanobacteriota, Cyanobacteriia, Cyanobacteriales, Spirulinaceae, Spirulina_A, Spirulina_A subsalsa

NCBI taxonomy: Bacteria, Cyanobacteriota, Cyanophyceae, Spirulinales, Spirulinaceae, Spirulina, Spirulina subsalsa

Scaffolds: 2

Genes: 4,617 Protein-coding: 4,521 RNAs: 51 pseudogenes: 45

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_ALVR01000010.1 Spirulina subsalsa PCC 9445 Contig203_C, whole genome shotgun sequence 105,309
NZ_JH980292.1 Spirulina subsalsa PCC 9445 Contig210, whole genome shotgun sequence 5,218,291

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory