fast.genomicscompare 6,575 genera of bacteria & archaea

 

Methanobrevibacter_B boviskoreani JH1

Genome identifier: GCF_000320505.1

NCBI assembly name: ASM32050v2

GTDB taxonomy: Archaea, Methanobacteriota, Methanobacteria, Methanobacteriales, Methanobacteriaceae, Methanobrevibacter_B, Methanobrevibacter_B boviskoreani

NCBI taxonomy: Archaea, Euryarchaeota, Methanobacteria, Methanobacteriales, Methanobacteriaceae, Methanobrevibacter, Methanobrevibacter boviskoreani

Scaffolds: 54

Genes: 1,797 Protein-coding: 1,743 RNAs: 41 pseudogenes: 13

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_BAGX02000001.1 Methanobrevibacter boviskoreani JH1, whole genome shotgun sequence 66,803
NZ_BAGX02000002.1 Methanobrevibacter boviskoreani JH1, whole genome shotgun sequence 16,782
NZ_BAGX02000003.1 Methanobrevibacter boviskoreani JH1, whole genome shotgun sequence 20,781
NZ_BAGX02000004.1 Methanobrevibacter boviskoreani JH1, whole genome shotgun sequence 6,117
NZ_BAGX02000005.1 Methanobrevibacter boviskoreani JH1, whole genome shotgun sequence 17,613
NZ_BAGX02000006.1 Methanobrevibacter boviskoreani JH1, whole genome shotgun sequence 3,148
NZ_BAGX02000007.1 Methanobrevibacter boviskoreani JH1, whole genome shotgun sequence 120,936
NZ_BAGX02000008.1 Methanobrevibacter boviskoreani JH1, whole genome shotgun sequence 112,396
NZ_BAGX02000009.1 Methanobrevibacter boviskoreani JH1, whole genome shotgun sequence 1,613
NZ_BAGX02000010.1 Methanobrevibacter boviskoreani JH1, whole genome shotgun sequence 191,828
NZ_BAGX02000011.1 Methanobrevibacter boviskoreani JH1, whole genome shotgun sequence 33,451
NZ_BAGX02000012.1 Methanobrevibacter boviskoreani JH1, whole genome shotgun sequence 28,013
NZ_BAGX02000013.1 Methanobrevibacter boviskoreani JH1, whole genome shotgun sequence 86,964
NZ_BAGX02000014.1 Methanobrevibacter boviskoreani JH1, whole genome shotgun sequence 8,811
NZ_BAGX02000015.1 Methanobrevibacter boviskoreani JH1, whole genome shotgun sequence 65,249
NZ_BAGX02000016.1 Methanobrevibacter boviskoreani JH1, whole genome shotgun sequence 107,381
NZ_BAGX02000017.1 Methanobrevibacter boviskoreani JH1, whole genome shotgun sequence 3,102
NZ_BAGX02000018.1 Methanobrevibacter boviskoreani JH1, whole genome shotgun sequence 13,859
NZ_BAGX02000019.1 Methanobrevibacter boviskoreani JH1, whole genome shotgun sequence 16,783
NZ_BAGX02000020.1 Methanobrevibacter boviskoreani JH1, whole genome shotgun sequence 379,907
NZ_BAGX02000021.1 Methanobrevibacter boviskoreani JH1, whole genome shotgun sequence 89,700
NZ_BAGX02000022.1 Methanobrevibacter boviskoreani JH1, whole genome shotgun sequence 43,629
NZ_BAGX02000023.1 Methanobrevibacter boviskoreani JH1, whole genome shotgun sequence 152,099
NZ_BAGX02000024.1 Methanobrevibacter boviskoreani JH1, whole genome shotgun sequence 29,998
NZ_BAGX02000025.1 Methanobrevibacter boviskoreani JH1, whole genome shotgun sequence 27,360
NZ_BAGX02000026.1 Methanobrevibacter boviskoreani JH1, whole genome shotgun sequence 41,402
NZ_BAGX02000027.1 Methanobrevibacter boviskoreani JH1, whole genome shotgun sequence 12,058
NZ_BAGX02000028.1 Methanobrevibacter boviskoreani JH1, whole genome shotgun sequence 53,378
NZ_BAGX02000029.1 Methanobrevibacter boviskoreani JH1, whole genome shotgun sequence 24,497
NZ_BAGX02000030.1 Methanobrevibacter boviskoreani JH1, whole genome shotgun sequence 1,624
NZ_BAGX02000031.1 Methanobrevibacter boviskoreani JH1, whole genome shotgun sequence 23,636
NZ_BAGX02000032.1 Methanobrevibacter boviskoreani JH1, whole genome shotgun sequence 69,322
NZ_BAGX02000033.1 Methanobrevibacter boviskoreani JH1, whole genome shotgun sequence 18,402
NZ_BAGX02000034.1 Methanobrevibacter boviskoreani JH1, whole genome shotgun sequence 37,858
NZ_BAGX02000035.1 Methanobrevibacter boviskoreani JH1, whole genome shotgun sequence 38,822
NZ_BAGX02000036.1 Methanobrevibacter boviskoreani JH1, whole genome shotgun sequence 31,519
NZ_BAGX02000037.1 Methanobrevibacter boviskoreani JH1, whole genome shotgun sequence 36,879
NZ_BAGX02000038.1 Methanobrevibacter boviskoreani JH1, whole genome shotgun sequence 3,131
NZ_BAGX02000039.1 Methanobrevibacter boviskoreani JH1, whole genome shotgun sequence 1,785
NZ_BAGX02000040.1 Methanobrevibacter boviskoreani JH1, whole genome shotgun sequence 1,548
NZ_BAGX02000041.1 Methanobrevibacter boviskoreani JH1, whole genome shotgun sequence 795
NZ_BAGX02000042.1 Methanobrevibacter boviskoreani JH1, whole genome shotgun sequence 741
NZ_BAGX02000043.1 Methanobrevibacter boviskoreani JH1, whole genome shotgun sequence 520
NZ_BAGX02000044.1 Methanobrevibacter boviskoreani JH1, whole genome shotgun sequence 482
NZ_BAGX02000045.1 Methanobrevibacter boviskoreani JH1, whole genome shotgun sequence 472
NZ_BAGX02000046.1 Methanobrevibacter boviskoreani JH1, whole genome shotgun sequence 472
NZ_BAGX02000047.1 Methanobrevibacter boviskoreani JH1, whole genome shotgun sequence 396
NZ_BAGX02000048.1 Methanobrevibacter boviskoreani JH1, whole genome shotgun sequence 383
NZ_BAGX02000049.1 Methanobrevibacter boviskoreani JH1, whole genome shotgun sequence 318
NZ_BAGX02000050.1 Methanobrevibacter boviskoreani JH1, whole genome shotgun sequence 299
NZ_BAGX02000051.1 Methanobrevibacter boviskoreani JH1, whole genome shotgun sequence 291
NZ_BAGX02000052.1 Methanobrevibacter boviskoreani JH1, whole genome shotgun sequence 173
NZ_BAGX02000053.1 Methanobrevibacter boviskoreani JH1, whole genome shotgun sequence 171
NZ_BAGX02000054.1 Methanobrevibacter boviskoreani JH1, whole genome shotgun sequence 104

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory