fast.genomicscompare 6,575 genera of bacteria & archaea

 

Halorubrum saccharovorum DSM 1137

Genome identifier: GCF_000337915.1

NCBI assembly name: ASM33791v1

GTDB taxonomy: Archaea, Halobacteriota, Halobacteria, Halobacteriales, Haloferacaceae, Halorubrum, Halorubrum saccharovorum

NCBI taxonomy: Archaea, Euryarchaeota, Halobacteria, Haloferacales, Haloferacaceae, Halorubrum, Halorubrum saccharovorum

Scaffolds: 72

Genes: 3,401 Protein-coding: 3,258 RNAs: 59 pseudogenes: 84

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_AOJE01000001.1 Halorubrum saccharovorum DSM 1137 contig_1, whole genome shotgun sequence 1,895
NZ_AOJE01000002.1 Halorubrum saccharovorum DSM 1137 contig_2, whole genome shotgun sequence 352
NZ_AOJE01000003.1 Halorubrum saccharovorum DSM 1137 contig_3, whole genome shotgun sequence 1,684
NZ_AOJE01000004.1 Halorubrum saccharovorum DSM 1137 contig_4, whole genome shotgun sequence 259
NZ_AOJE01000005.1 Halorubrum saccharovorum DSM 1137 contig_5, whole genome shotgun sequence 194,749
NZ_AOJE01000006.1 Halorubrum saccharovorum DSM 1137 contig_6, whole genome shotgun sequence 97,224
NZ_AOJE01000007.1 Halorubrum saccharovorum DSM 1137 contig_7, whole genome shotgun sequence 4,395
NZ_AOJE01000008.1 Halorubrum saccharovorum DSM 1137 contig_8, whole genome shotgun sequence 49,237
NZ_AOJE01000009.1 Halorubrum saccharovorum DSM 1137 contig_9, whole genome shotgun sequence 4,467
NZ_AOJE01000010.1 Halorubrum saccharovorum DSM 1137 contig_10, whole genome shotgun sequence 255,389
NZ_AOJE01000011.1 Halorubrum saccharovorum DSM 1137 contig_11, whole genome shotgun sequence 183,455
NZ_AOJE01000012.1 Halorubrum saccharovorum DSM 1137 contig_12, whole genome shotgun sequence 194,587
NZ_AOJE01000013.1 Halorubrum saccharovorum DSM 1137 contig_13, whole genome shotgun sequence 43,791
NZ_AOJE01000014.1 Halorubrum saccharovorum DSM 1137 contig_14, whole genome shotgun sequence 12,264
NZ_AOJE01000015.1 Halorubrum saccharovorum DSM 1137 contig_15, whole genome shotgun sequence 45,959
NZ_AOJE01000016.1 Halorubrum saccharovorum DSM 1137 contig_16, whole genome shotgun sequence 80,471
NZ_AOJE01000017.1 Halorubrum saccharovorum DSM 1137 contig_17, whole genome shotgun sequence 6,817
NZ_AOJE01000018.1 Halorubrum saccharovorum DSM 1137 contig_18, whole genome shotgun sequence 46,063
NZ_AOJE01000019.1 Halorubrum saccharovorum DSM 1137 contig_19, whole genome shotgun sequence 23,642
NZ_AOJE01000020.1 Halorubrum saccharovorum DSM 1137 contig_20, whole genome shotgun sequence 113,338
NZ_AOJE01000021.1 Halorubrum saccharovorum DSM 1137 contig_21, whole genome shotgun sequence 177,830
NZ_AOJE01000022.1 Halorubrum saccharovorum DSM 1137 contig_22, whole genome shotgun sequence 232
NZ_AOJE01000023.1 Halorubrum saccharovorum DSM 1137 contig_23, whole genome shotgun sequence 5,046
NZ_AOJE01000024.1 Halorubrum saccharovorum DSM 1137 contig_24, whole genome shotgun sequence 2,566
NZ_AOJE01000025.1 Halorubrum saccharovorum DSM 1137 contig_25, whole genome shotgun sequence 82,268
NZ_AOJE01000026.1 Halorubrum saccharovorum DSM 1137 contig_26, whole genome shotgun sequence 58,633
NZ_AOJE01000027.1 Halorubrum saccharovorum DSM 1137 contig_27, whole genome shotgun sequence 1,560
NZ_AOJE01000028.1 Halorubrum saccharovorum DSM 1137 contig_28, whole genome shotgun sequence 38,645
NZ_AOJE01000029.1 Halorubrum saccharovorum DSM 1137 contig_29, whole genome shotgun sequence 1,421
NZ_AOJE01000030.1 Halorubrum saccharovorum DSM 1137 contig_30, whole genome shotgun sequence 755
NZ_AOJE01000031.1 Halorubrum saccharovorum DSM 1137 contig_31, whole genome shotgun sequence 259
NZ_AOJE01000032.1 Halorubrum saccharovorum DSM 1137 contig_32, whole genome shotgun sequence 458
NZ_AOJE01000033.1 Halorubrum saccharovorum DSM 1137 contig_33, whole genome shotgun sequence 483
NZ_AOJE01000034.1 Halorubrum saccharovorum DSM 1137 contig_34, whole genome shotgun sequence 610
NZ_AOJE01000035.1 Halorubrum saccharovorum DSM 1137 contig_35, whole genome shotgun sequence 255
NZ_AOJE01000036.1 Halorubrum saccharovorum DSM 1137 contig_36, whole genome shotgun sequence 822
NZ_AOJE01000037.1 Halorubrum saccharovorum DSM 1137 contig_37, whole genome shotgun sequence 12,933
NZ_AOJE01000038.1 Halorubrum saccharovorum DSM 1137 contig_38, whole genome shotgun sequence 18,829
NZ_AOJE01000039.1 Halorubrum saccharovorum DSM 1137 contig_39, whole genome shotgun sequence 480
NZ_AOJE01000040.1 Halorubrum saccharovorum DSM 1137 contig_40, whole genome shotgun sequence 1,566
NZ_AOJE01000041.1 Halorubrum saccharovorum DSM 1137 contig_41, whole genome shotgun sequence 926
NZ_AOJE01000042.1 Halorubrum saccharovorum DSM 1137 contig_42, whole genome shotgun sequence 719
NZ_AOJE01000043.1 Halorubrum saccharovorum DSM 1137 contig_43, whole genome shotgun sequence 108,475
NZ_AOJE01000044.1 Halorubrum saccharovorum DSM 1137 contig_44, whole genome shotgun sequence 9,749
NZ_AOJE01000045.1 Halorubrum saccharovorum DSM 1137 contig_45, whole genome shotgun sequence 24,470
NZ_AOJE01000046.1 Halorubrum saccharovorum DSM 1137 contig_46, whole genome shotgun sequence 218
NZ_AOJE01000047.1 Halorubrum saccharovorum DSM 1137 contig_47, whole genome shotgun sequence 549
NZ_AOJE01000048.1 Halorubrum saccharovorum DSM 1137 contig_48, whole genome shotgun sequence 1,942
NZ_AOJE01000049.1 Halorubrum saccharovorum DSM 1137 contig_49, whole genome shotgun sequence 218
NZ_AOJE01000050.1 Halorubrum saccharovorum DSM 1137 contig_50, whole genome shotgun sequence 9,293
NZ_AOJE01000051.1 Halorubrum saccharovorum DSM 1137 contig_51, whole genome shotgun sequence 48,216
NZ_AOJE01000052.1 Halorubrum saccharovorum DSM 1137 contig_52, whole genome shotgun sequence 880
NZ_AOJE01000053.1 Halorubrum saccharovorum DSM 1137 contig_53, whole genome shotgun sequence 1,078
NZ_AOJE01000054.1 Halorubrum saccharovorum DSM 1137 contig_54, whole genome shotgun sequence 273
NZ_AOJE01000055.1 Halorubrum saccharovorum DSM 1137 contig_55, whole genome shotgun sequence 272
NZ_AOJE01000056.1 Halorubrum saccharovorum DSM 1137 contig_56, whole genome shotgun sequence 26,775
NZ_AOJE01000057.1 Halorubrum saccharovorum DSM 1137 contig_57, whole genome shotgun sequence 279,133
NZ_AOJE01000058.1 Halorubrum saccharovorum DSM 1137 contig_58, whole genome shotgun sequence 59,288
NZ_AOJE01000059.1 Halorubrum saccharovorum DSM 1137 contig_59, whole genome shotgun sequence 62,969
NZ_AOJE01000060.1 Halorubrum saccharovorum DSM 1137 contig_60, whole genome shotgun sequence 263,815
NZ_AOJE01000061.1 Halorubrum saccharovorum DSM 1137 contig_61, whole genome shotgun sequence 12,576
NZ_AOJE01000062.1 Halorubrum saccharovorum DSM 1137 contig_62, whole genome shotgun sequence 59,265
NZ_AOJE01000063.1 Halorubrum saccharovorum DSM 1137 contig_63, whole genome shotgun sequence 11,817
NZ_AOJE01000064.1 Halorubrum saccharovorum DSM 1137 contig_64, whole genome shotgun sequence 38,310
NZ_AOJE01000065.1 Halorubrum saccharovorum DSM 1137 contig_65, whole genome shotgun sequence 32,689
NZ_AOJE01000066.1 Halorubrum saccharovorum DSM 1137 contig_66, whole genome shotgun sequence 87,572
NZ_AOJE01000067.1 Halorubrum saccharovorum DSM 1137 contig_67, whole genome shotgun sequence 66,562
NZ_AOJE01000068.1 Halorubrum saccharovorum DSM 1137 contig_68, whole genome shotgun sequence 3,826
NZ_AOJE01000069.1 Halorubrum saccharovorum DSM 1137 contig_69, whole genome shotgun sequence 68,524
NZ_AOJE01000070.1 Halorubrum saccharovorum DSM 1137 contig_70, whole genome shotgun sequence 368,416
NZ_AOJE01000071.1 Halorubrum saccharovorum DSM 1137 contig_71, whole genome shotgun sequence 5,367
NZ_AOJE01000072.1 Halorubrum saccharovorum DSM 1137 contig_72, whole genome shotgun sequence 3,832

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory