fast.genomicscompare 6,575 genera of bacteria & archaea

 

Dasania marina DSM 21967

Genome identifier: GCF_000373485.1

NCBI assembly name: ASM37348v1

GTDB taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, Pseudomonadales, DSM-21967, Dasania, Dasania marina

NCBI taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, Cellvibrionales, Spongiibacteraceae, Dasania, Dasania marina

Scaffolds: 18

Genes: 3,680 Protein-coding: 3,604 RNAs: 58 pseudogenes: 18

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_KB891575.1 Dasania marina DSM 21967 B067DRAFT_scaffold_0.1, whole genome shotgun sequence 1,008,263
NZ_KB891576.1 Dasania marina DSM 21967 B067DRAFT_scaffold_1.2, whole genome shotgun sequence 760,556
NZ_KB891577.1 Dasania marina DSM 21967 B067DRAFT_scaffold_10.11, whole genome shotgun sequence 76,086
NZ_KB891578.1 Dasania marina DSM 21967 B067DRAFT_scaffold_11.12, whole genome shotgun sequence 73,506
NZ_KB891579.1 Dasania marina DSM 21967 B067DRAFT_scaffold_12.13, whole genome shotgun sequence 59,819
NZ_KB891580.1 Dasania marina DSM 21967 B067DRAFT_scaffold_13.14, whole genome shotgun sequence 50,036
NZ_KB891581.1 Dasania marina DSM 21967 B067DRAFT_scaffold_14.15, whole genome shotgun sequence 23,664
NZ_KB891582.1 Dasania marina DSM 21967 B067DRAFT_scaffold_15.16, whole genome shotgun sequence 5,914
NZ_KB891583.1 Dasania marina DSM 21967 B067DRAFT_scaffold_16.17, whole genome shotgun sequence 1,809
NZ_KB891584.1 Dasania marina DSM 21967 B067DRAFT_scaffold_17.18, whole genome shotgun sequence 1,631
NZ_KB891585.1 Dasania marina DSM 21967 B067DRAFT_scaffold_2.3, whole genome shotgun sequence 676,505
NZ_KB891586.1 Dasania marina DSM 21967 B067DRAFT_scaffold_3.4, whole genome shotgun sequence 506,754
NZ_KB891587.1 Dasania marina DSM 21967 B067DRAFT_scaffold_4.5, whole genome shotgun sequence 207,945
NZ_KB891588.1 Dasania marina DSM 21967 B067DRAFT_scaffold_5.6, whole genome shotgun sequence 156,574
NZ_KB891589.1 Dasania marina DSM 21967 B067DRAFT_scaffold_6.7, whole genome shotgun sequence 152,958
NZ_KB891590.1 Dasania marina DSM 21967 B067DRAFT_scaffold_7.8, whole genome shotgun sequence 120,861
NZ_KB891591.1 Dasania marina DSM 21967 B067DRAFT_scaffold_8.9, whole genome shotgun sequence 120,699
NZ_KB891592.1 Dasania marina DSM 21967 B067DRAFT_scaffold_9.10, whole genome shotgun sequence 101,408

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory