fast.genomicscompare 6,575 genera of bacteria & archaea

 

Alkalispirochaeta alkalica DSM 8900

Genome identifier: GCF_000373545.1

NCBI assembly name: ASM37354v1

GTDB taxonomy: Bacteria, Spirochaetota, Spirochaetia, DSM-27196, Alkalispirochaetaceae, Alkalispirochaeta, Alkalispirochaeta alkalica

NCBI taxonomy: Bacteria, Spirochaetota, Spirochaetia, Spirochaetales, Spirochaetaceae, Alkalispirochaeta, Alkalispirochaeta alkalica

Scaffolds: 71

Genes: 2,706 Protein-coding: 2,633 RNAs: 53 pseudogenes: 20

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_KB891691.1 Alkalispirochaeta alkalica DSM 8900 B071DRAFT_scaffold_0.1, whole genome shotgun sequence 367,735
NZ_KB891692.1 Alkalispirochaeta alkalica DSM 8900 B071DRAFT_scaffold_1.2, whole genome shotgun sequence 235,034
NZ_KB891693.1 Alkalispirochaeta alkalica DSM 8900 B071DRAFT_scaffold_10.11, whole genome shotgun sequence 135,061
NZ_KB891694.1 Alkalispirochaeta alkalica DSM 8900 B071DRAFT_scaffold_11.12, whole genome shotgun sequence 115,345
NZ_KB891695.1 Alkalispirochaeta alkalica DSM 8900 B071DRAFT_scaffold_12.13, whole genome shotgun sequence 101,067
NZ_KB891696.1 Alkalispirochaeta alkalica DSM 8900 B071DRAFT_scaffold_13.14, whole genome shotgun sequence 98,794
NZ_KB891697.1 Alkalispirochaeta alkalica DSM 8900 B071DRAFT_scaffold_14.15, whole genome shotgun sequence 83,022
NZ_KB891698.1 Alkalispirochaeta alkalica DSM 8900 B071DRAFT_scaffold_15.16, whole genome shotgun sequence 76,234
NZ_KB891699.1 Alkalispirochaeta alkalica DSM 8900 B071DRAFT_scaffold_16.17, whole genome shotgun sequence 72,027
NZ_KB891700.1 Alkalispirochaeta alkalica DSM 8900 B071DRAFT_scaffold_17.18, whole genome shotgun sequence 72,610
NZ_KB891701.1 Alkalispirochaeta alkalica DSM 8900 B071DRAFT_scaffold_18.19, whole genome shotgun sequence 70,709
NZ_KB891702.1 Alkalispirochaeta alkalica DSM 8900 B071DRAFT_scaffold_19.20, whole genome shotgun sequence 65,933
NZ_KB891703.1 Alkalispirochaeta alkalica DSM 8900 B071DRAFT_scaffold_2.3, whole genome shotgun sequence 191,395
NZ_KB891704.1 Alkalispirochaeta alkalica DSM 8900 B071DRAFT_scaffold_20.21, whole genome shotgun sequence 63,417
NZ_KB891705.1 Alkalispirochaeta alkalica DSM 8900 B071DRAFT_scaffold_21.22, whole genome shotgun sequence 49,383
NZ_KB891706.1 Alkalispirochaeta alkalica DSM 8900 B071DRAFT_scaffold_22.23, whole genome shotgun sequence 46,138
NZ_KB891707.1 Alkalispirochaeta alkalica DSM 8900 B071DRAFT_scaffold_23.24, whole genome shotgun sequence 31,039
NZ_KB891708.1 Alkalispirochaeta alkalica DSM 8900 B071DRAFT_scaffold_24.25, whole genome shotgun sequence 36,213
NZ_KB891709.1 Alkalispirochaeta alkalica DSM 8900 B071DRAFT_scaffold_25.26, whole genome shotgun sequence 28,472
NZ_KB891710.1 Alkalispirochaeta alkalica DSM 8900 B071DRAFT_scaffold_26.27, whole genome shotgun sequence 25,105
NZ_KB891711.1 Alkalispirochaeta alkalica DSM 8900 B071DRAFT_scaffold_27.28, whole genome shotgun sequence 20,605
NZ_KB891712.1 Alkalispirochaeta alkalica DSM 8900 B071DRAFT_scaffold_28.29, whole genome shotgun sequence 16,325
NZ_KB891713.1 Alkalispirochaeta alkalica DSM 8900 B071DRAFT_scaffold_29.30, whole genome shotgun sequence 16,185
NZ_KB891714.1 Alkalispirochaeta alkalica DSM 8900 B071DRAFT_scaffold_3.4, whole genome shotgun sequence 186,494
NZ_KB891715.1 Alkalispirochaeta alkalica DSM 8900 B071DRAFT_scaffold_30.31, whole genome shotgun sequence 15,534
NZ_KB891716.1 Alkalispirochaeta alkalica DSM 8900 B071DRAFT_scaffold_31.32, whole genome shotgun sequence 15,856
NZ_KB891717.1 Alkalispirochaeta alkalica DSM 8900 B071DRAFT_scaffold_32.33, whole genome shotgun sequence 15,046
NZ_KB891718.1 Alkalispirochaeta alkalica DSM 8900 B071DRAFT_scaffold_33.34, whole genome shotgun sequence 12,961
NZ_KB891719.1 Alkalispirochaeta alkalica DSM 8900 B071DRAFT_scaffold_34.35, whole genome shotgun sequence 6,904
NZ_KB891720.1 Alkalispirochaeta alkalica DSM 8900 B071DRAFT_scaffold_35.36, whole genome shotgun sequence 7,147
NZ_KB891721.1 Alkalispirochaeta alkalica DSM 8900 B071DRAFT_scaffold_36.37, whole genome shotgun sequence 7,067
NZ_KB891722.1 Alkalispirochaeta alkalica DSM 8900 B071DRAFT_scaffold_37.38, whole genome shotgun sequence 6,762
NZ_KB891723.1 Alkalispirochaeta alkalica DSM 8900 B071DRAFT_scaffold_38.39, whole genome shotgun sequence 6,623
NZ_KB891724.1 Alkalispirochaeta alkalica DSM 8900 B071DRAFT_scaffold_39.40, whole genome shotgun sequence 6,548
NZ_KB891725.1 Alkalispirochaeta alkalica DSM 8900 B071DRAFT_scaffold_4.5, whole genome shotgun sequence 184,629
NZ_KB891726.1 Alkalispirochaeta alkalica DSM 8900 B071DRAFT_scaffold_40.41, whole genome shotgun sequence 6,538
NZ_KB891727.1 Alkalispirochaeta alkalica DSM 8900 B071DRAFT_scaffold_41.42, whole genome shotgun sequence 6,413
NZ_KB891728.1 Alkalispirochaeta alkalica DSM 8900 B071DRAFT_scaffold_42.43, whole genome shotgun sequence 5,999
NZ_KB891729.1 Alkalispirochaeta alkalica DSM 8900 B071DRAFT_scaffold_43.44, whole genome shotgun sequence 5,236
NZ_KB891730.1 Alkalispirochaeta alkalica DSM 8900 B071DRAFT_scaffold_44.45, whole genome shotgun sequence 4,902
NZ_KB891731.1 Alkalispirochaeta alkalica DSM 8900 B071DRAFT_scaffold_45.46, whole genome shotgun sequence 4,261
NZ_KB891732.1 Alkalispirochaeta alkalica DSM 8900 B071DRAFT_scaffold_46.47, whole genome shotgun sequence 4,004
NZ_KB891733.1 Alkalispirochaeta alkalica DSM 8900 B071DRAFT_scaffold_47.48, whole genome shotgun sequence 3,649
NZ_KB891734.1 Alkalispirochaeta alkalica DSM 8900 B071DRAFT_scaffold_48.49, whole genome shotgun sequence 3,447
NZ_KB891735.1 Alkalispirochaeta alkalica DSM 8900 B071DRAFT_scaffold_49.50, whole genome shotgun sequence 3,267
NZ_KB891736.1 Alkalispirochaeta alkalica DSM 8900 B071DRAFT_scaffold_5.6, whole genome shotgun sequence 184,600
NZ_KB891737.1 Alkalispirochaeta alkalica DSM 8900 B071DRAFT_scaffold_50.51, whole genome shotgun sequence 3,010
NZ_KB891738.1 Alkalispirochaeta alkalica DSM 8900 B071DRAFT_scaffold_51.52, whole genome shotgun sequence 2,992
NZ_KB891739.1 Alkalispirochaeta alkalica DSM 8900 B071DRAFT_scaffold_52.53, whole genome shotgun sequence 2,713
NZ_KB891740.1 Alkalispirochaeta alkalica DSM 8900 B071DRAFT_scaffold_53.54, whole genome shotgun sequence 1,826
NZ_KB891741.1 Alkalispirochaeta alkalica DSM 8900 B071DRAFT_scaffold_54.55, whole genome shotgun sequence 1,760
NZ_KB891742.1 Alkalispirochaeta alkalica DSM 8900 B071DRAFT_scaffold_55.56, whole genome shotgun sequence 1,775
NZ_KB891743.1 Alkalispirochaeta alkalica DSM 8900 B071DRAFT_scaffold_56.57, whole genome shotgun sequence 1,534
NZ_KB891744.1 Alkalispirochaeta alkalica DSM 8900 B071DRAFT_scaffold_57.58, whole genome shotgun sequence 1,534
NZ_KB891745.1 Alkalispirochaeta alkalica DSM 8900 B071DRAFT_scaffold_58.59, whole genome shotgun sequence 1,517
NZ_KB891746.1 Alkalispirochaeta alkalica DSM 8900 B071DRAFT_scaffold_59.60, whole genome shotgun sequence 1,450
NZ_KB891747.1 Alkalispirochaeta alkalica DSM 8900 B071DRAFT_scaffold_6.7, whole genome shotgun sequence 175,040
NZ_KB891748.1 Alkalispirochaeta alkalica DSM 8900 B071DRAFT_scaffold_60.61, whole genome shotgun sequence 1,447
NZ_KB891749.1 Alkalispirochaeta alkalica DSM 8900 B071DRAFT_scaffold_61.62, whole genome shotgun sequence 1,410
NZ_KB891750.1 Alkalispirochaeta alkalica DSM 8900 B071DRAFT_scaffold_62.63, whole genome shotgun sequence 1,259
NZ_KB891751.1 Alkalispirochaeta alkalica DSM 8900 B071DRAFT_scaffold_63.64, whole genome shotgun sequence 1,310
NZ_KB891752.1 Alkalispirochaeta alkalica DSM 8900 B071DRAFT_scaffold_64.65, whole genome shotgun sequence 1,306
NZ_KB891753.1 Alkalispirochaeta alkalica DSM 8900 B071DRAFT_scaffold_65.66, whole genome shotgun sequence 1,259
NZ_KB891754.1 Alkalispirochaeta alkalica DSM 8900 B071DRAFT_scaffold_66.67, whole genome shotgun sequence 1,277
NZ_KB891755.1 Alkalispirochaeta alkalica DSM 8900 B071DRAFT_scaffold_67.68, whole genome shotgun sequence 1,232
NZ_KB891756.1 Alkalispirochaeta alkalica DSM 8900 B071DRAFT_scaffold_68.69, whole genome shotgun sequence 1,131
NZ_KB891757.1 Alkalispirochaeta alkalica DSM 8900 B071DRAFT_scaffold_69.70, whole genome shotgun sequence 1,033
NZ_KB891758.1 Alkalispirochaeta alkalica DSM 8900 B071DRAFT_scaffold_7.8, whole genome shotgun sequence 153,220
NZ_KB891759.1 Alkalispirochaeta alkalica DSM 8900 B071DRAFT_scaffold_70.71, whole genome shotgun sequence 1,008
NZ_KB891760.1 Alkalispirochaeta alkalica DSM 8900 B071DRAFT_scaffold_8.9, whole genome shotgun sequence 145,061
NZ_KB891761.1 Alkalispirochaeta alkalica DSM 8900 B071DRAFT_scaffold_9.10, whole genome shotgun sequence 129,475

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory