fast.genomicscompare 6,575 genera of bacteria & archaea

 

Neomegalonema perideroedes DSM 15528

Genome identifier: GCF_000374145.1

NCBI assembly name: ASM37414v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Rhodobacteraceae, Neomegalonema, Neomegalonema perideroedes

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Neomegalonemataceae, Neomegalonema, Neomegalonema perideroedes

Scaffolds: 17

Genes: 3,106 Protein-coding: 3,028 RNAs: 53 pseudogenes: 25

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_KB893653.1 Neomegalonema perideroedes DSM 15528 B161DRAFT_scaffold_0.1, whole genome shotgun sequence 1,522,649
NZ_KB893654.1 Neomegalonema perideroedes DSM 15528 B161DRAFT_scaffold_1.2, whole genome shotgun sequence 1,196,865
NZ_KB893655.1 Neomegalonema perideroedes DSM 15528 B161DRAFT_scaffold_10.11, whole genome shotgun sequence 29,483
NZ_KB893656.1 Neomegalonema perideroedes DSM 15528 B161DRAFT_scaffold_11.12, whole genome shotgun sequence 11,397
NZ_KB893657.1 Neomegalonema perideroedes DSM 15528 B161DRAFT_scaffold_12.13, whole genome shotgun sequence 6,097
NZ_KB893658.1 Neomegalonema perideroedes DSM 15528 B161DRAFT_scaffold_13.14, whole genome shotgun sequence 5,725
NZ_KB893659.1 Neomegalonema perideroedes DSM 15528 B161DRAFT_scaffold_14.15, whole genome shotgun sequence 4,265
NZ_KB893660.1 Neomegalonema perideroedes DSM 15528 B161DRAFT_scaffold_15.16, whole genome shotgun sequence 3,697
NZ_KB893661.1 Neomegalonema perideroedes DSM 15528 B161DRAFT_scaffold_16.17, whole genome shotgun sequence 1,301
NZ_KB893662.1 Neomegalonema perideroedes DSM 15528 B161DRAFT_scaffold_2.3, whole genome shotgun sequence 135,734
NZ_KB893663.1 Neomegalonema perideroedes DSM 15528 B161DRAFT_scaffold_3.4, whole genome shotgun sequence 133,435
NZ_KB893664.1 Neomegalonema perideroedes DSM 15528 B161DRAFT_scaffold_4.5, whole genome shotgun sequence 120,448
NZ_KB893665.1 Neomegalonema perideroedes DSM 15528 B161DRAFT_scaffold_5.6, whole genome shotgun sequence 88,919
NZ_KB893666.1 Neomegalonema perideroedes DSM 15528 B161DRAFT_scaffold_6.7, whole genome shotgun sequence 54,374
NZ_KB893667.1 Neomegalonema perideroedes DSM 15528 B161DRAFT_scaffold_7.8, whole genome shotgun sequence 35,181
NZ_KB893668.1 Neomegalonema perideroedes DSM 15528 B161DRAFT_scaffold_8.9, whole genome shotgun sequence 30,848
NZ_KB893669.1 Neomegalonema perideroedes DSM 15528 B161DRAFT_scaffold_9.10, whole genome shotgun sequence 29,531

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory