fast.genomicscompare 6,575 genera of bacteria & archaea

 

Amorphus coralli DSM 19760

Genome identifier: GCF_000374525.1

NCBI assembly name: ASM37452v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhizobiales, Amorphaceae, Amorphus, Amorphus coralli

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Hyphomicrobiales, Amorphaceae, Amorphus, Amorphus coralli

Scaffolds: 12

Genes: 3,948 Protein-coding: 3,867 RNAs: 54 pseudogenes: 27

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_KB894570.1 Amorphus coralli DSM 19760 C507DRAFT_scaffold00001.1, whole genome shotgun sequence 899,064
NZ_KB894571.1 Amorphus coralli DSM 19760 C507DRAFT_scaffold00002.2, whole genome shotgun sequence 822,153
NZ_KB894572.1 Amorphus coralli DSM 19760 C507DRAFT_scaffold00003.3, whole genome shotgun sequence 605,459
NZ_KB894573.1 Amorphus coralli DSM 19760 C507DRAFT_scaffold00004.4, whole genome shotgun sequence 498,185
NZ_KB894574.1 Amorphus coralli DSM 19760 C507DRAFT_scaffold00005.5, whole genome shotgun sequence 464,424
NZ_KB894575.1 Amorphus coralli DSM 19760 C507DRAFT_scaffold00006.6, whole genome shotgun sequence 393,796
NZ_KB894576.1 Amorphus coralli DSM 19760 C507DRAFT_scaffold00007.7, whole genome shotgun sequence 234,130
NZ_KB894577.1 Amorphus coralli DSM 19760 C507DRAFT_scaffold00008.8, whole genome shotgun sequence 196,553
NZ_KB894578.1 Amorphus coralli DSM 19760 C507DRAFT_scaffold00009.9, whole genome shotgun sequence 178,803
NZ_KB894579.1 Amorphus coralli DSM 19760 C507DRAFT_scaffold00010.10, whole genome shotgun sequence 17,679
NZ_KB894580.1 Amorphus coralli DSM 19760 C507DRAFT_scaffold00011.11, whole genome shotgun sequence 5,567
NZ_KB894581.1 Amorphus coralli DSM 19760 C507DRAFT_scaffold00012.12, whole genome shotgun sequence 1,732

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory