fast.genomicscompare 6,575 genera of bacteria & archaea

 

Arhodomonas aquaeolei DSM 8974

Genome identifier: GCF_000374645.1

NCBI assembly name: ASM37464v1

GTDB taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, Nitrococcales, Nitrococcaceae, Arhodomonas, Arhodomonas aquaeolei

NCBI taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, Chromatiales, Ectothiorhodospiraceae, Arhodomonas, Arhodomonas aquaeolei

Scaffolds: 48

Genes: 3,613 Protein-coding: 3,529 RNAs: 58 pseudogenes: 26

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_KB894800.1 Arhodomonas aquaeolei DSM 8974 C516DRAFT_scaffold00001.1, whole genome shotgun sequence 527,320
NZ_KB894801.1 Arhodomonas aquaeolei DSM 8974 C516DRAFT_scaffold00002.2, whole genome shotgun sequence 500,257
NZ_KB894802.1 Arhodomonas aquaeolei DSM 8974 C516DRAFT_scaffold00003.3, whole genome shotgun sequence 273,653
NZ_KB894803.1 Arhodomonas aquaeolei DSM 8974 C516DRAFT_scaffold00004.4, whole genome shotgun sequence 228,364
NZ_KB894804.1 Arhodomonas aquaeolei DSM 8974 C516DRAFT_scaffold00005.5, whole genome shotgun sequence 214,008
NZ_KB894805.1 Arhodomonas aquaeolei DSM 8974 C516DRAFT_scaffold00006.6, whole genome shotgun sequence 182,190
NZ_KB894806.1 Arhodomonas aquaeolei DSM 8974 C516DRAFT_scaffold00007.7, whole genome shotgun sequence 161,256
NZ_KB894807.1 Arhodomonas aquaeolei DSM 8974 C516DRAFT_scaffold00008.8, whole genome shotgun sequence 156,060
NZ_KB894808.1 Arhodomonas aquaeolei DSM 8974 C516DRAFT_scaffold00009.9, whole genome shotgun sequence 149,005
NZ_KB894809.1 Arhodomonas aquaeolei DSM 8974 C516DRAFT_scaffold00010.10, whole genome shotgun sequence 140,782
NZ_KB894810.1 Arhodomonas aquaeolei DSM 8974 C516DRAFT_scaffold00011.11, whole genome shotgun sequence 136,950
NZ_KB894811.1 Arhodomonas aquaeolei DSM 8974 C516DRAFT_scaffold00012.12, whole genome shotgun sequence 130,820
NZ_KB894812.1 Arhodomonas aquaeolei DSM 8974 C516DRAFT_scaffold00013.13, whole genome shotgun sequence 123,577
NZ_KB894813.1 Arhodomonas aquaeolei DSM 8974 C516DRAFT_scaffold00014.14, whole genome shotgun sequence 118,832
NZ_KB894814.1 Arhodomonas aquaeolei DSM 8974 C516DRAFT_scaffold00015.15, whole genome shotgun sequence 93,766
NZ_KB894815.1 Arhodomonas aquaeolei DSM 8974 C516DRAFT_scaffold00016.16, whole genome shotgun sequence 85,910
NZ_KB894816.1 Arhodomonas aquaeolei DSM 8974 C516DRAFT_scaffold00017.17, whole genome shotgun sequence 83,689
NZ_KB894817.1 Arhodomonas aquaeolei DSM 8974 C516DRAFT_scaffold00018.18, whole genome shotgun sequence 66,334
NZ_KB894818.1 Arhodomonas aquaeolei DSM 8974 C516DRAFT_scaffold00019.19, whole genome shotgun sequence 60,358
NZ_KB894819.1 Arhodomonas aquaeolei DSM 8974 C516DRAFT_scaffold00020.20, whole genome shotgun sequence 53,965
NZ_KB894820.1 Arhodomonas aquaeolei DSM 8974 C516DRAFT_scaffold00021.21, whole genome shotgun sequence 46,648
NZ_KB894821.1 Arhodomonas aquaeolei DSM 8974 C516DRAFT_scaffold00022.22, whole genome shotgun sequence 43,686
NZ_KB894822.1 Arhodomonas aquaeolei DSM 8974 C516DRAFT_scaffold00023.23, whole genome shotgun sequence 41,980
NZ_KB894823.1 Arhodomonas aquaeolei DSM 8974 C516DRAFT_scaffold00024.24, whole genome shotgun sequence 41,849
NZ_KB894824.1 Arhodomonas aquaeolei DSM 8974 C516DRAFT_scaffold00025.25, whole genome shotgun sequence 38,302
NZ_KB894825.1 Arhodomonas aquaeolei DSM 8974 C516DRAFT_scaffold00026.26, whole genome shotgun sequence 37,882
NZ_KB894826.1 Arhodomonas aquaeolei DSM 8974 C516DRAFT_scaffold00027.27, whole genome shotgun sequence 37,670
NZ_KB894827.1 Arhodomonas aquaeolei DSM 8974 C516DRAFT_scaffold00028.28, whole genome shotgun sequence 31,265
NZ_KB894828.1 Arhodomonas aquaeolei DSM 8974 C516DRAFT_scaffold00029.29, whole genome shotgun sequence 29,952
NZ_KB894829.1 Arhodomonas aquaeolei DSM 8974 C516DRAFT_scaffold00030.30, whole genome shotgun sequence 16,631
NZ_KB894830.1 Arhodomonas aquaeolei DSM 8974 C516DRAFT_scaffold00031.31, whole genome shotgun sequence 15,632
NZ_KB894831.1 Arhodomonas aquaeolei DSM 8974 C516DRAFT_scaffold00032.32, whole genome shotgun sequence 11,945
NZ_KB894832.1 Arhodomonas aquaeolei DSM 8974 C516DRAFT_scaffold00033.33, whole genome shotgun sequence 11,200
NZ_KB894833.1 Arhodomonas aquaeolei DSM 8974 C516DRAFT_scaffold00034.34, whole genome shotgun sequence 11,068
NZ_KB894834.1 Arhodomonas aquaeolei DSM 8974 C516DRAFT_scaffold00035.35, whole genome shotgun sequence 9,566
NZ_KB894835.1 Arhodomonas aquaeolei DSM 8974 C516DRAFT_scaffold00036.36, whole genome shotgun sequence 6,323
NZ_KB894836.1 Arhodomonas aquaeolei DSM 8974 C516DRAFT_scaffold00037.37, whole genome shotgun sequence 5,961
NZ_KB894837.1 Arhodomonas aquaeolei DSM 8974 C516DRAFT_scaffold00038.38, whole genome shotgun sequence 5,412
NZ_KB894838.1 Arhodomonas aquaeolei DSM 8974 C516DRAFT_scaffold00039.39, whole genome shotgun sequence 5,249
NZ_KB894839.1 Arhodomonas aquaeolei DSM 8974 C516DRAFT_scaffold00040.40, whole genome shotgun sequence 4,590
NZ_KB894840.1 Arhodomonas aquaeolei DSM 8974 C516DRAFT_scaffold00041.41, whole genome shotgun sequence 3,346
NZ_KB894841.1 Arhodomonas aquaeolei DSM 8974 C516DRAFT_scaffold00042.42, whole genome shotgun sequence 3,310
NZ_KB894842.1 Arhodomonas aquaeolei DSM 8974 C516DRAFT_scaffold00043.43, whole genome shotgun sequence 2,394
NZ_KB894843.1 Arhodomonas aquaeolei DSM 8974 C516DRAFT_scaffold00044.44, whole genome shotgun sequence 2,242
NZ_KB894844.1 Arhodomonas aquaeolei DSM 8974 C516DRAFT_scaffold00045.45, whole genome shotgun sequence 2,154
NZ_KB894845.1 Arhodomonas aquaeolei DSM 8974 C516DRAFT_scaffold00046.46, whole genome shotgun sequence 1,730
NZ_KB894846.1 Arhodomonas aquaeolei DSM 8974 C516DRAFT_scaffold00047.47, whole genome shotgun sequence 1,399
NZ_KB894847.1 Arhodomonas aquaeolei DSM 8974 C516DRAFT_scaffold00048.48, whole genome shotgun sequence 1,287

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory